KEGG   Mizuhopecten yessoensis (Yesso scallop): 110464690
Entry
110464690         CDS       T05079                                 
Name
(RefSeq) DNA topoisomerase 3-alpha-like isoform X1
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
myi  Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03440  Homologous recombination
myi03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:myi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    110464690
   03460 Fanconi anemia pathway
    110464690
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:myi03032]
    110464690
   03400 DNA repair and recombination proteins [BR:myi03400]
    110464690
Enzymes [BR:myi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     110464690
DNA replication proteins [BR:myi03032]
 Eukaryotic type
  DNA Topoisomerases
   110464690
DNA repair and recombination proteins [BR:myi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     110464690
   FA (Fanconi anemia) pathway
     110464690
SSDB
Motif
Pfam: Topoisom_bac zf-GRF Toprim zf-C4_Topoisom
Other DBs
NCBI-GeneID: 110464690
NCBI-ProteinID: XP_021375710
Position
Unknown
AA seq 1033 aa
MVLLPIRRAFCTSSKEKMVRILNVAEKNDAAKSIAAVMSRGSARKREGFSKFNKIYEFEY
NILNHNNCTMTMTSVSGHLLGLDFIGNYKKWYSCNPVALFDVEVEKYCPQNFMDIKRTLE
REVKGAQSLIIWTDCDREGENIGFEVIQVCKNVKPNIPVYRARFSEITPQAIQRACRNLL
EPDKNTSDAVDVRMELDLRIGAAFTRFQTLRLQKIFPEVLSDQLISYGSCQFPTLGFVVE
RYKQVQAFVPEPFWKIKVTHKQEDSNIEFSWKRVRLFDNTACLVLYEHCTENPTATVKDI
KCKSKSKWRPQPLDTVELEKLASRKLRINAKETMKIAEKLYTGGNISYPRTETNKFPPDF
DLRRLVEQQTVDDEWGEFAGRVLEQGPRPRNGNKTDQAHPPIHPTKYCNNLQGNEKRIYD
FVVRHFLATCSSDAQGQETIVEIDIAEEKFSAQGLMITARNYLDVYPYDRWNAKVIPVYS
QGDTFQPNSIEMTESETSPPSLLSEADLIALMDKHGIGTDATHADHIETIKSRMYVGLQG
DNRFIPGHLGMGLVEGYDAMGYEMSKPNLRAELEADLSRICSGTKDKNVVLEEQKQKYKQ
VFIEACRQALKIDEALAKYLGEAQPMPAEHALETLASSPIKKCPNCGQDMMLKSKKDGKG
FYIGCMGYPNCRNAVWLPDFVLEATAEDSNCHNCDRVRLIKFKFKRGSVPPMVPTEYCGC
IGCDETLTEALNLNRNIGSSQRPVPSSNQTNLSDSGIGSTYHSQSQASGRTNSRPTQSTQ
PQRTQNTSMSNSTNQQNNTNNQRYSNTNNNTYNTQTGYGSQGGNSRAPLVPVMPFNTSGP
TADGGGNAIVCSCGEDALLLTVRKEGPNTGRQFYKCGSSKCNFFLWADETPNNEDGGGGG
GGGGGGGGGGYDSYNRTTNTSGRGNPPPQSGESGGEECNCGNLAKKLSVQKEGPNKGRQF
LSCNKPRGEGCNFFQWVDEAGMNENTRGGGATWKQGDSKKRAGSNSGGPTTKKARKCGLC
GEEGHTRKTCPHK
NT seq 3102 nt   +upstreamnt  +downstreamnt
atggtgctattaccgatacgcagggcattctgtacatcttccaaagagaaaatggtcagg
atattgaatgttgcagagaaaaatgatgccgcgaagtcaatcgctgctgtcatgtcaagg
ggaagtgctcgaaagagggaaggattttccaaattcaacaagatttatgaatttgagtac
aacattctgaatcacaacaattgcactatgaccatgacatcagtgtccggccatctttta
gggctggacttcataggcaattacaagaaatggtatagctgtaatcctgttgccctgttt
gatgtggaggtggagaagtactgtcctcaaaattttatggacatcaaaagaactctcgaa
agagaggtaaaaggagcacagtcccttatcatctggacagactgtgaccgtgaaggcgaa
aacattgggtttgaagtcattcaagtttgtaaaaatgtaaaaccgaacataccagtatac
cgagcaaggttttctgagatcactccacaagcaatccaaagagcctgtagaaacctactt
gaacctgacaagaacaccagtgatgctgtagatgtccgaatggagctggacctaagaata
ggggctgcatttacaagattccagacgttaagactacagaaaatattccctgaggttctg
tcagatcagctgatcagctacggcagctgtcagttccctacccttggttttgtggtggaa
agatacaaacaagttcaagcttttgtaccagagccattttggaagatcaaagtgacccac
aaacaggaagacagtaacatagaattcagctggaaaagggtgcgcctttttgacaacact
gcttgtctggttttatatgaacactgcactgagaatcctactgcaacagtgaaagatatc
aagtgtaaaagtaaaagcaagtggaggcctcagccgctggatactgtggaattggaaaag
cttgcttctagaaaattacgaataaatgctaaggaaacaatgaaaatagctgaaaaattg
tacactggagggaacattagctaccctcgaacagagaccaacaaattcccaccagacttt
gatcttaggagactagtggaacaacagaccgttgatgacgaatggggagagtttgcaggg
agagtgttagagcaagggccaaggccacggaatggcaataagacagatcaggcccatccc
cccatacatcctaccaagtattgtaacaacctacagggcaatgaaaaaagaatttacgat
tttgttgtgagacatttcctagcaacctgctccagtgatgcacagggtcaggaaaccatt
gtggaaatagacattgcagaggagaagttttcagctcagggcctaatgattactgccagg
aattacctagatgtgtatccttatgaccgctggaatgccaaggtgattccagtgtacagc
caaggagatactttccagcctaactccatagagatgactgaatcagaaacaagccctcca
tctttactctcagaggctgatttgattgctttgatggacaaacatggcattggaacagac
gctactcacgctgatcatatagagaccatcaaaagtcgcatgtatgttggactacaggga
gataacagattcatccctggtcatcttggaatgggacttgtggagggttatgatgctatg
ggatacgaaatgtccaaaccaaatctccgagctgaattagaggcagatttatcaaggatt
tgttctggcactaaagataaaaatgttgtattagaagagcagaaacagaaatacaaacaa
gtgttcattgaagcttgtcgacaggcgttgaagattgatgaagcactggccaagtatctg
ggagaggcccagcctatgcctgctgaacatgctttagaaacattagcctcttcacccata
aagaaatgtcccaactgtggtcaggatatgatgttgaaatcaaagaaagacggaaaaggc
ttctacattggctgtatgggttacccaaactgtagaaacgccgtctggctgcctgatttt
gtactggaagccactgctgaagacagcaattgtcataattgtgacagagtacgcctgatc
aagtttaagttcaaacgaggttctgtccctcctatggtgcctacagagtactgtggctgt
ataggatgtgatgaaaccctcactgaggccctgaatcttaacaggaacattggttcaagt
cagaggcctgttccatcttccaaccagacaaatctgtctgatagtggtataggttcaacg
taccactcccagtcccaggccagtggtagaacaaacagcaggccgacacagtctacccag
cctcagaggacacaaaatacctcaatgtccaacagtacaaaccaacagaacaacacaaat
aaccagaggtactccaatacaaataataacacctacaatacccagacaggatatggctcc
cagggaggtaactcccgtgctcccttggtgcctgtgatgccattcaacacatctggtcct
acagctgatggtggtggtaatgccattgtgtgttcctgtggggaggatgctctgttactg
actgttcgtaaagagggacccaatacaggtcggcaattctacaaatgtgggtcctctaaa
tgtaatttcttcctgtgggctgatgagacacctaacaatgaggatggaggaggaggaggc
ggaggtggaggagggggaggaggcggcggctacgactcatacaacagaaccaccaacact
tctggaaggggaaacccacctccacaatcaggagagtcaggaggcgaggaatgtaactgt
ggaaacctggctaaaaaattatcagtgcaaaaagaaggcccaaacaaagggaggcaattc
ctatcgtgcaataaaccccgtggtgaaggttgtaatttcttccaatgggttgatgaagca
ggaatgaatgaaaatacccgtggaggtggtgctacctggaaacaaggagactctaaaaaa
cgtgcggggtctaacagtgggggaccgacaaccaagaaggcgaggaaatgtgggttatgt
ggagaggaaggccacacaagaaagacatgtccacacaagtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (85)   
   KEGG ORTHOLOGY (1)   
   RefGene (81)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (101)   

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