KEGG T04077: A176

Myxococcus hansupus: A176_006713

Entry

A176_006713       CDS       T04077

Name

(GenBank) RNA-2',3'-PO4:RNA-5'-OH ligase

K14415

tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]

Organism

mym Myxococcus hansupus

Brite

KEGG Orthology (KO) [BR:mym00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mym03016]
    A176_006713
Enzymes [BR:mym01000]
6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     A176_006713
Transfer RNA biogenesis [BR:mym03016]
Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    A176_006713
Prokaryotic type
   tRNA splicing ligases
    A176_006713

SSDB

Motif

Pfam:

RtcB

Other DBs

NCBI-ProteinID:

AKQ69801

UniProt:

A0A0H4X2B5

Position

complement(8274612..8275769)

AA seq 385 aa
MMPRVLPAVPGGRPILVWARALPPGAEKQLRYLAAQPYVVEHVAAMPDLHVASGIAVGTV
FATDHHVVPGALGGDLGCGVSAWRFPLTEGLPGRDVLERVLARLAEVVPVGDAVHRGKGL
PLPAALASPPLSTRKLCHAWERLAPRHLGTLGGGNHFLELDRDAEGALWLLLHTGSRGVG
AAIADHHGRVARALGEGHLPALSLHTDEGAACLADTQWACRFARANRDTLAARALAVLED
ALGVAAEPGSAVDVHHNHVAREVHAGREVWVHRKGAVGLQAGERGLIPGSMGTASYVVEG
LGEPRAFGSCSHGAGRVLTRTEARARIRPAALEQALRRVVYERGRTAALVEEAPAAYRDI
TEVLEDEADLVRPLVRLTPLAVLKG

NT seq 1158 nt +upstreamnt +downstreamnt
atgatgcctcgcgtccttcccgccgtgcccgggggccggcccatcctcgtctgggcccgc
gcgctgccgccgggcgcggagaagcagttgcggtacctcgccgcccagccctacgtggtg
gagcacgtcgccgccatgccggacctccacgtcgcctcgggcatcgccgtgggcaccgtc
ttcgccacggaccaccacgtggtgccgggggcgctggggggcgacctgggctgcggcgtg
agcgcctggcgtttcccgctcaccgaagggctgcccggccgcgacgtgttggagcgcgtg
ttggcgcggctggcggaggtggtgcccgtgggcgacgcggtccaccggggaaaggggctg
ccgctgcccgccgcgctggcgtcgccacccctgtccacccggaagctgtgccacgcctgg
gagcggctggcgcccaggcacctggggacgctcgggggtggcaaccacttcctcgagctg
gaccgggacgcggagggcgccctctggctcctcttgcataccggctcccggggcgtgggc
gcggccatcgcggaccaccacggccgcgtggcgcgggcgctcggggaggggcacctgccc
gccctgagcctccacaccgacgagggcgccgcctgcctcgcggacacacagtgggcctgc
cgcttcgcccgggcgaaccgggacaccctcgccgcgcgggcgttggcggtcctggaagac
gcgttgggcgtggccgccgagcccggctccgccgtggacgtccaccacaaccacgtggcc
cgggaggtccacgcgggccgcgaggtgtgggtccaccgcaagggcgccgtcgggctccag
gccggcgagcgagggctcatccccggctccatgggcacggcgtcgtacgtcgtggaagga
ctgggggagccgcgagccttcggctcctgctcgcatggcgccgggcgcgtcctcacgcgg
acggaggcgcgagcccgcatccgcccggcggcgttggagcaggcgctgcgacgcgtggtg
tatgagcgggggcgcaccgccgcgctggtggaggaggcccccgccgcctaccgcgacatc
accgaggtgctggaggacgaggcggacctggtccggccgttggtgcgcctcacgccgctc
gccgtcctgaagggctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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