KEGG   Maylandia zebra (zebra mbuna): 101465861
Entry
101465861         CDS       T02814                                 
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
mze  Maylandia zebra (zebra mbuna)
Pathway
mze03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mze00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    101465861 (xpc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mze03400]
    101465861 (xpc)
DNA repair and recombination proteins [BR:mze03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      101465861 (xpc)
SSDB
Motif
Pfam: BHD_3 Rad4 BHD_1 BHD_2
Other DBs
NCBI-GeneID: 101465861
NCBI-ProteinID: XP_012775311
UniProt: A0A3P9D184
Position
LG20:complement(8130694..8141191)
AA seq 932 aa
MARRRECANTGGDTKKLKQVLKAKSCGAKTRAKKKNAGEDIKDKEEKIERKVIPKPRAPS
KRAAGNKLSSQSDTSSAVNTSKYFESPIMEENDSEDDFDMVTSPPRLKVNTKKPEKEEEE
EGEDSEEEDEDDWEEVEELAEPLGPLEPLEPVLPSEPVEIEIETPEVRKRQKKQAELETY
LRRMVNRYKKDLLIDTHKVHLMCLIASAMFRNRLCSEPDLLAITLSLLPAHFTMAAKRID
QNYLSGLLKWFRATFTLNSSLPCEEVPDPQRLLERRLASLSARNHEEMTHLFLLVLRSLQ
LFCRLVLSLQPIPFKAPSAKAKGARTSAGAPEKSNTSKESSKTNSPEPKISPGTKRPAGG
RTIKGDVGGKKAKKKEKDEEEEKKVVVSGGQRPKNSKRRSVASKVSYKEESNSEGEEDGG
LSDEDEFQATSEDDSEDSESGVKSKKGNKGKGKAKGTHSRNTAAPKRRSSGGKKQVKDEE
DGDLEEEEEEEGGEGTTSNGTKRRSGAKREGPGADEWLEVYLEKTASWVCVDVDHGVGVP
QLCYRNATTPVTYVVSVDGDGFVKDLGKKYDPTWMTSSRKRRVDDDWWEETLEPFLGPED
EKDIKEDKELQKTLLNKPLPVSVAEYKNHPLYALKRHLLKYEAIYPPTATVLGYCRGEPV
YSRDCVHTLHSRDTWLKEARTVRLGEEPYKMVKGFSNRSRKARMTSELKDENDLALFGEW
QTEEYQPPIAVDGKVPRNDYGNVYLFKPCMLPVGCVHIRLPNLHRVARKLNIDAAPAVTG
FDFHGGYSHAVTDGYIACEEHEEVLRAAWVEEQELQKQKEKEKKEKRAISNWTLLVKGLL
IRERLKKRYNKKNQGLGSLAHGGDAEGFSSDEEAAEGESPGAKTASETLAMSWPQNRQAE
EDGGNASGLKKKKVTKREKKGQEQHLFPFEKV
NT seq 2799 nt   +upstreamnt  +downstreamnt
atggcgaggaggagagagtgcgcaaacacggggggcgacacaaagaaactgaagcaggtg
ctgaaagcgaagagctgcggggcaaaaacaagagcgaagaaaaaaaatgctggtgaggac
atcaaagataaagaggaaaagatagagaggaaggtcatccctaagccccgcgcgccctca
aagcgagcagcaggaaataaattgtcttcccaatctgacaccagctctgctgtcaatacc
agcaaatactttgagtcacccattatggaggagaatgatagcgaagatgactttgatatg
gtgacctccccaccacggcttaaggtgaacaccaagaaaccagagaaagaagaagaagaa
gaaggggaggacagtgaggaggaagatgaggatgattgggaagaagtggaagagctagct
gagccgctgggtccacttgagcctctagaacccgtcctgccctctgagcctgtggagatt
gagatcgagaccccagaagtcagaaagaggcaaaaaaagcaggcggaacttgagacatat
ctgaggcgaatggtgaaccgatataagaaggacctgctgatagacacccacaaggtccac
ctcatgtgcctgattgccagcgccatgttccgcaacaggttgtgcagtgaaccagacctg
ctggccatcactctgtcgctgctgcctgcccacttcaccatggcagctaagcgcatcgac
caaaactacctctctgggctgcttaaatggtttagagcaacatttaccctcaactccagt
cttccctgtgaagaggttccggacccccagaggctcctcgagaggcgactggcaagcctc
tcagccagaaaccacgaggagatgactcacctgtttctcttggtcctacgctctctgcag
cttttctgccgattggtcctttctttgcagccgattcctttcaaagccccatcagccaag
gccaaaggggctagaacatctgctggtgccccagaaaagagcaacacaagcaaggaatca
tccaagacaaactcccctgagccaaagatttctcctggcaccaagagaccagcaggaggg
agaacgatcaaaggagatgtaggaggaaagaaagcaaagaagaaagaaaaggatgaggag
gaagagaagaaagttgtagtatcaggggggcagagaccaaagaactcaaaacgccgcagt
gttgcctcaaaggtcagctacaaggaagagagcaacagcgaaggggaggaggatggaggg
cttagtgacgaagatgagtttcaagccaccagtgaggatgacagtgaggattcagagagt
ggggttaaatctaaaaaggggaataaagggaaagggaaggccaagggcacacacagcaga
aatactgcagctccaaagagaagaagcagtggaggtaaaaaacaggtaaaagatgaggag
gatggagacttggaagaagaagaggaagaagaaggaggagaaggaacaacgagcaatgga
acaaaaaggaggagtggggcaaagagagaaggcccaggtgcagacgagtggttagaggtg
tatctggagaaaacagcttcctgggtttgcgtagatgtggatcacggtgttggagttcct
caactctgctaccggaatgcaaccacaccggtgacatatgtggtgtctgtggacggggac
gggtttgtgaaagacctgggaaagaagtatgacccgacttggatgacatcatccaggaag
aggcgggtggatgatgactggtgggaggaaacgcttgagccattcttgggacccgaggac
gagaaagacataaaggaagacaaggagctccagaaaactcttctgaacaaacccctgcca
gtgtctgtagcggagtataagaaccacccgctgtatgccttaaagagacacctgctgaaa
tatgaggccatctatcctcctacagccactgtgctgggatactgcagaggggagccagta
tactctcgggactgtgtgcacaccctgcactccagagacacgtggctgaaagaagcaagg
actgtccggttaggggaggagccatacaagatggtgaagggcttctctaatcgttcccgt
aaggccaggatgacgtctgagctgaaggatgagaatgacctggctctgtttggagaatgg
caaactgaagagtaccagccgccgatagccgtggatgggaaggtcccacgtaatgactac
ggtaatgtctacctgtttaaaccctgtatgttgccggtgggctgtgttcatatcaggttg
cccaacctgcaccgcgtggccaggaaactgaacattgatgcagcgcctgcagtcacaggt
ttcgacttccatggaggatactcgcacgctgtcactgatggctacattgcgtgtgaggag
cacgaggaggtcctcagagctgcgtgggtggaagaacaagagcttcagaaacagaaggag
aaagagaaaaaagagaagagggccatctccaactggactctgctggtcaaaggactcctg
atcagagaaaggcttaaaaagcgttacaacaagaagaaccagggattggggagccttgct
catggaggtgacgccgaagggttttcctcagatgaggaggctgctgagggtgaaagtccg
ggagctaagacggcatccgagactctagcaatgtcctggcctcagaacagacaagcagag
gaggatggtggaaatgccagcggactgaagaagaagaaagtaacaaaacgagagaagaag
ggtcaagagcaacatttattcccctttgagaaagtgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (4)   
   Pfam (4)   
All databases (53)   

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