KEGG   Maylandia zebra (zebra mbuna): 101470057
Entry
101470057         CDS       T02814                                 
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
  KO
K03010  DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
Organism
mze  Maylandia zebra (zebra mbuna)
Pathway
mze03020  RNA polymerase
mze03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mze00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101470057 (polr2b)
  09124 Replication and repair
   03420 Nucleotide excision repair
    101470057 (polr2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mze03021]
    101470057 (polr2b)
   03400 DNA repair and recombination proteins [BR:mze03400]
    101470057 (polr2b)
Enzymes [BR:mze01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     101470057 (polr2b)
Transcription machinery [BR:mze03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     101470057 (polr2b)
DNA repair and recombination proteins [BR:mze03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101470057 (polr2b)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 101470057
NCBI-ProteinID: XP_004563694
Position
Unknown
AA seq 1174 aa
MYDQDEDNQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTAECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPENDDELDSTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMTS
NT seq 3525 nt   +upstreamnt  +downstreamnt
atgtatgaccaggatgaagataatcagtatgatgaagatgatgatgagatcactcctgac
ctgtggcaggaagcgtgctggatcgtcatcagctcttattttgacgagaaagggctggtg
cggcagcaactagattccttcgatgagttcattcagatgtctgttcagaggatcgtggag
gatgctccgcccatcgacctgcaggctgaagctcagcacacctcaggggaggtggaggag
ccgcctcggtatctcctgaagtttgagcagatctacctgtctaagcccacccactgggag
agagatggagcaccatctcccatgatgcccaacgaggcacggctgaggaacctgacgtac
tctgcgccactgtatgtggacatcacaaagacaatcatcaaggagggagaggatcagctg
cagacgcagcaccagaagaccttcattgggaaaattcccatcatgcttcgctccacgtac
tgcctgctaagtggcctgactgaccgagacctgtgcgaactcaacgagtgcccattggac
cctggaggttacttcatcatcaatgggtcagaaaaggtgctgatcgctcaggaaaagatg
gccaccaacacggtgtacgtgtttgccaagaaggactcgaagtatgcgtacaccgcagag
tgccgatcctgcctggaaaattcatcccgcccaaccagcacgatctgggtcagcatgatg
gctcgaggagggcagggagtgaagaagagcgccataggtcagaggatcgtctccacgctt
ccctacatccgacaggaagttcccatcatcattgtgttccgggcactgggcttcgtatcg
gacagagacatcctggaacatatcatttatgactttgatgaccctgagatgatggagatg
gtgaagccctctctggacgaagcttttgtgatccaggagcagaacgtggcgttgaacttc
attggctcacgaggcgcaaaacccggtgtgacgaaggagcgacggattaaatacgcaaag
gaagtcctgcaaaaggagatgctgccacatgtcggcgtaagcgatttctgcgagaccaag
aaggcctacttcttagggtacatggtgcacaggttgctgctcgccgctctcggcaggcgg
gaactggatgacagagatcactatggcaacaagaggctggacctcgccgggccattactg
gccttcctgttccgaggcatgtttaaaaacctgctgaaggaaatcaggatctatgctcag
aagttcatcgaccgcgggaaggatttcaacctagagctcgccattaagacgcgtatcatc
tctgacgggctcaagtactctcttgccacaggtaactggggtgacgtgaagaaggctcac
caggcccgagccggcgtgtcacaggtgttgaaccgtctcaccttcgcatccacactgtct
cacctgcgccgggtcaactctcctatcggtcgagatggaaaactggcgaaacctcgacag
ctgcacaacacgctatgggggatggtgtgtccggccgagacgcccgagggtcacgctgtg
gggctggtgaagaacttggccctgatggcctacatctctgtgggctcgcagccatcgccc
atcctggagtttctggaggagtggagcatggagaacctggaggagatctcacctgcggcc
attgcagatgccactaaaatctttgtgaatggctgctgggtgggaatccacaaagatcca
gaacagctgatgaatacactgaggaaactccgcagacagatggatatcatcgtctctgag
gtgtcgatgatcagagacattagagagcgtgagatcagaatttacacggacgctggacga
atctgccgaccgctgctgattgtcgagaaacagaaactgctgctgaagagacgccacatc
gaccagctgaaggagcgcgagtataacaactacagctggcaggacttagtggccagcggt
gtggtggagtacatagacaccctagaagaggagaccgtcatgctcgctatgaccccagat
gacctccaggagaaaggcgtggcctattgttccacctacacccactgtgagatccatcca
tctatgatccttggagtgtgtgcgtccatcatcccattccctgatcacaaccagtctccc
aggaacacatatcagtccgccatggggaagcaggccatgggtgtttacatcaccaacttc
catgttcgaatggacacgctcgctcacgtgctgtactaccctcagaaaccactcgtcacc
acccgctccatggagtacctgcgcttcagggagctccccgcaggtattaactcgattgtg
gcgatcgcctcatacactggctacaaccaggaagactctgtgatcatgaacaggtcagcc
gtggatcgaggcttcttcaggtctgtgttctatcggtcatacaaagagcaggagtctaag
aaaggctttgatcaggaggagatctttgagaagccgacgcgtgaaacctgtcaagggatg
cgacatgccatctatgacaaactggatgacgatggactcattgcacctggcgtccgtgtt
tctggcgaggacgtgatcattgggaagacggtgacactgccagagaatgacgacgagctg
gatagcacgaaccgccgctacacgaagagagactgcagcacgtttctgaggaccagtgag
acgggcatcgtggaccaggtcatggtgaccctgaatcaggagggctacaagttctgcaaa
atcagggtacgctctgtccgaattcctcagatcggcgacaaatttgccagccgacacgga
cagaagggaacctgtgggatccagtacagacaggaggacatgccattcacctgtgagggg
atcactcctgacatcatcatcaaccctcacgccattccgtccagaatgacagtcggccat
ttgattgagtgtctgcaggggaaggtgtctgccaacaaaggtgagatcggtgacgccacg
ccatttaacgatgccgtcaacgtgcagaaggtgtcaaacttgctgtctgaatatggatac
catctcagagggaatgaggttctgtataacggcttcactgggaggaagctgacgtctcag
atcttcatcggcccaacttattaccagcgcctgaagcacatggtggacgataagatccac
tcgagagcccgcggcccggtccagattctcaaccgacaacccatggaggggcgctcacgt
gatggtggtttgcggtttggcgagatggagcgtgactgtcagattgctcacggagcagct
cagttcctgagggagcgtctgttcgaggcatctgatccctaccaggtgcacgtttgtaac
ctgtgcggactgatggccatcgccaacacacggacacacacgtacgaatgtcgtggttgc
cgcaacaaaacccagatctctctggtgcggatgccatacgcctgtaagcttctgttccag
gagttgatgtcaatgagcattgctcctcgtatgatgacatcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (51)   
   KEGG ORTHOLOGY (1)   
   RefGene (47)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (72)   

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