KEGG   Maylandia zebra (zebra mbuna): 101471659
Entry
101471659         CDS       T02814                                 
Symbol
ltn1
Name
(RefSeq) E3 ubiquitin-protein ligase listerin
  KO
K22377  E3 ubiquitin-protein ligase listerin [EC:2.3.2.27]
Organism
mze  Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:mze00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mze03009]
    101471659 (ltn1)
   04121 Ubiquitin system [BR:mze04121]
    101471659 (ltn1)
Enzymes [BR:mze01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101471659 (ltn1)
Ribosome biogenesis [BR:mze03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    101471659 (ltn1)
Ubiquitin system [BR:mze04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101471659 (ltn1)
SSDB
Motif
Pfam: zf-RING_2 zf-ANAPC11 FANCL_C zf-rbx1 RINGv zf-RING-like CTK3 zf-RING_16 zf-C3HC4_2 zf-C3HC4 C1_1
Other DBs
NCBI-GeneID: 101471659
NCBI-ProteinID: XP_004550073
UniProt: A0A3P9CUT6
Position
LG10:14359021..14374838
AA seq 1768 aa
MGGKNKQRTKGNVRPSSSGRAAEVLTREGGVIPAFVGFGSTVASELSYVPAVHGAEDIDN
LVDADFRLVLRKLSKRDVVTRLKAVQDFGSMCQERDADVVKGILPYWPRIYCKISVDHDR
RIREATQQAFEQLVLKVRRSLAPFLKSLMGHWILSQCDTHTPAASAAFQAFQAAFSPAKQ
PEAISFCKDEILNVLQDVLLKETADTLSDSQSLTEEEREAKYVRMLTSSLLGVKRLLSLL
LQDDRAALETGLAHLVNSGKFWKYGKHKIPQVRGAFFEMVCALCEFTPGLVHAEAARLCP
AVLLSIDDTDPVVLPPVWEAVLHVVSTIHDCWTHVNAKKGFLPKLWALLKEGGKGMAKAL
HPNLMPLLSKLPPEVTDPKMDFFTMFFTTFAQGLSSERAVTSPSESAAIVTSFVECLRYC
VLQNAEDVDDQGKIRSMLNSQQLLPLLENALRNPSLQNGPLFLSVTEMLISWEKRVGLQR
EGEASDSKDVFQRLLTDFWEELGLLCVSYVDNEEADPQALEGIATLLHVMRYPERVNKKQ
TQKKKSVRLCFSKPEENEKTGVEGDGAEKLAQAVSELVNEKAFGSLQTQHFEDVVCQLAQ
LCLVHVNEKNSERHLVFLSHLMRSFHTPRVFSTLAELDDKMTKDEKQRDEGIMKNPAVQF
LLERVVVWLAEKGRTDTEHLVEMVFSSLHCCSGQETNRILNHITTMGLSWGIILQIIQRA
CTDPETLKSCSDWLKGSVLGEQLLGLTEELCKVGSSSCDSISSTSGHSWTLISLVLSQHH
NNESLIGEVYMEKILEKLHATLSETKSLSDKGNMEPLISFICDVASTFFSSVQDCLLLVS
AEELLLTVFQLTAQDQAHTHLSDSLLHKMRKVCVAGVQSLVQHCEYEVKEGGFLHSAAVW
VRKQLLATPLDMKGIQVLVLAVQSVVESIISVCDQASSIIIQFFTLLMPSQTEWTRIRRA
LPPQWIKSPLLSSRLRDVCEKPSMDMWKFRELNKLPAHLCACALLGKVAHSAAFTHGGQS
EAESPSLQQNLTYTVSELLYALQWCKELNYSPTMVSTYHNMLTDWGLSEGLNGQVPMKPL
QETLYTRSVTEGGLWSLTLENYIHSNSLEGAAVRKLYGSANSLFPVSQSKLNTLQVLCPS
MSNEDRESLVALATAGLVNWQEDENVYGCLAVLLCCLNASTQVEDKVVQAILATVMEWRN
SREDWFLFSCDLSKATSEQLNLSVEIMRFLSWLVTRCPAILGGSQWDFLLCSMLAWLETA
SENVGSLWNPWVQLFVCENAGLIVKLNEFFTTLSSSNIADKLPPELAGEWTDFFVEGIYN
LLLPLPVSITEAFAEPDDPVFPLAVLQSVGVALTHVPVQQLTQNSLPPRFIADQKTNLPE
PLQTLLNTFCPLLLFKARPLQIAVYHILEKVMPQLPECDGEGDNNKSDDDRDEPCLSPPA
SLMAILSTCEELCDNILSGIQVGEFAVVQPLSVEYSCILGYLLSWKLLLTFFKSSSSHLR
ANYAQYLKRSCSLNKLLLHVFKLMPENPAYPGQEAEARETKTFFTESLNLAVDKCDSVEW
ELPHLACSVYYSTVQDLPAMVRLWWNSQEKRVSAAVEKFTIKYISPVLSAQEISSVHTST
QMFDSMTVKARSAAREVIATYSVDDIFIELVIQLPQNYPLGSIAVESGRRVGVAVQQWRN
WMLQLSTYLTHQNGSIMEGLALWKNNVDKRFEGIEDCMICFSVIHGSNYSLPKKACRTCK
KKFHSACLYKWFTSSNKSTCPLCRETFF
NT seq 5307 nt   +upstreamnt  +downstreamnt
atggggggtaagaataaacagcgaactaaaggaaatgttcggccgtccagcagcggccga
gctgctgaggttctgacccgggaaggtggcgtaatcccggcgtttgttggcttcggttcg
accgtcgcctcggagctgagttacgttccagctgtccacggcgcggaagacatagacaac
ctggtagatgcagatttccgcctggtgctcagaaaattgtcgaagagggatgttgtcacc
agactcaaggctgtgcaggattttgggtccatgtgtcaggaacgggatgctgatgttgtc
aaagggatcctaccatactggccaaggatttactgcaaaatatcagtggatcacgatcga
cgcattagggaggctacccagcaggcttttgagcagctggtgctaaaagtacgtcgcagc
ttggccccatttctgaaaagcttgatgggtcactggattctgtcccagtgtgacacccac
acacctgcagcctcagctgctttccaggccttccaggctgctttctcacccgcaaaacag
cctgaagctatcagcttctgcaaggatgaaatccttaatgtacttcaagatgttttgttg
aaggaaacggccgacacactgagtgattcccaaagtttgacggaggaggagagggaagcc
aaatatgtgcgcatgctgaccagttctctgttgggggtgaagagacttctctccctgctg
ctccaggatgacagggcggccctggagacaggactagcacatcttgttaattctggaaag
ttttggaaatatggcaaacacaagattccacaggtgaggggggcgttttttgagatggtg
tgtgctctgtgtgagttcacaccaggactggtccacgctgaagcagcgcgtctctgtccc
gctgtcctcctcagtatcgacgacacggatcctgtagtgctgccccccgtgtgggaggct
gttctccacgttgtgtctacaatccatgattgctggacacacgtgaatgccaagaaaggc
ttcttgcccaaactttgggctctgttaaaagagggcggcaaaggcatggctaaagcttta
cacccgaatctgatgccgcttcttagtaaactgcccccagaggtcactgatccaaagatg
gacttcttcaccatgttcttcactacattcgcacaaggtctttctagtgagcgtgcagta
acgagcccatcagaaagtgcggcgatagtgacatcttttgttgagtgcttgagatactgc
gtattacaaaatgcagaggatgtggacgaccaggggaaaataaggagcatgctgaattca
cagcagcttctacccctacttgaaaatgctctaagaaatccttcccttcagaatggtcct
ctcttcctttcggtcactgaaatgctcatttcctgggagaagagggtaggtttacaaagg
gaaggtgaagccagtgacagcaaagatgtctttcaaagacttctgacagacttctgggag
gaacttggtcttctctgtgtgagttatgttgacaacgaggaggcagatccacaggctttg
gaagggatagccaccttgctacatgtgatgcgttatcctgagagggtaaacaaaaagcaa
acacagaagaagaaatctgtcaggttgtgtttttctaaaccagaagaaaatgagaaaact
ggagttgagggggatggcgctgagaagcttgcgcaggcggtgtcagagcttgtgaatgag
aaagcatttgggtccctacagacgcagcattttgaagatgtagtgtgccagctggcacag
ctgtgcctggtgcatgtgaatgagaaaaactcagagagacatcttgttttcctctcccat
cttatgcggtctttccacacccccagagttttcagtacattggctgaattggatgacaaa
atgacaaaagacgagaagcagagggatgaggggattatgaaaaatccagcagtgcagttc
ctgttggagcgggtggtggtgtggctggctgaaaaggggcgcacagacaccgagcacctg
gtggagatggtcttcagctcgcttcactgctgcagtgggcaggagaccaaccgcatcctc
aaccatatcaccacgatgggtctgtcatggggaattatcctgcagattattcagagggca
tgtacggatccggagactctgaagagctgcagtgattggctaaaaggttcggttctgggt
gaacaactcctgggattgactgaggagctctgcaaggtggggagcagctcttgcgactcc
atctcttctacaagcggccacagttggacgcttatcagcctggtcctctctcagcatcac
aacaatgagtctctgatcggagaggtgtacatggagaaaatcttggagaaactccacgcc
actctgtctgagaccaaaagcctatcagataaaggcaacatggagccactcatctccttc
atttgtgatgtggcttccacgttcttctcttctgtacaagactgccttcttctcgtctcc
gctgaggagctcttgctcaccgtcttccagctcactgctcaagatcaggcgcacactcac
ttatctgactcacttttacataaaatgaggaaagtgtgcgtggctggggtccagtcattg
gtccaacactgtgaatatgaggtcaaagaaggcggcttcctgcacagtgcagctgtttgg
gtgaggaagcagctgcttgccacaccgctggatatgaaaggcatacaggttctagttttg
gccgtacaaagcgtggtggagtcgatcatctctgtctgtgatcaggcgtcctccatcatc
atccagttctttaccctcctgatgcccagccagacagagtggacaagaatcaggcgggcc
ttacctcctcagtggatcaaaagccctttactgtctagccgtttgcgagatgtttgtgaa
aaaccctccatggacatgtggaagttcagggagttgaacaagctgccagcccacctgtgt
gcctgtgctcttttagggaaggtggcacacagtgctgcattcacacatggtggccagagt
gaggcagaaagtccttcacttcaacaaaaccttacatacacagtttcagaactactttac
gctctgcagtggtgtaaggagttaaactacagccctacgatggtgtcgacatatcacaac
atgctgactgactggggcctctcagaagggcttaatggacaggttccaatgaaacccctg
caggagactctctacacgaggtcagtgacagagggaggtctgtggtctctgactctagaa
aactacatccacagcaacagcttggaaggcgcagcagtgaggaagctttatggtagtgca
aacagtttgttcccagtgtctcaaagcaaactgaacacactccaggtactctgccccagt
atgagcaatgaagacagggagagtcttgtagctttggctactgctggattagtcaactgg
caggaggatgaaaatgtgtatgggtgtctggcagtgctgctgtgctgtctgaatgccagc
acacaagtagaggacaaggttgtgcaggctatcctggccactgtgatggaatggaggaac
agcagggaggactggttcctctttagctgtgacctgtccaaagcaacttcagagcagttg
aaccttagtgtggagatcatgcggttcctgtcctggctggtgactcgctgtccagcaatt
ctagggggaagccagtgggacttcctgctgtgctctatgttggcatggttggagactgcc
agtgagaatgttggaagtctatggaacccatgggtgcagctctttgtgtgcgagaacgct
ggattgatagtgaagctgaatgagttcttcacaacattatcttcgtccaatatagcagac
aagctgccaccagaactggctggcgaatggacagatttctttgtagagggaatctacaac
ctgctgttaccgctgcctgtcagtatcacagaggcctttgctgaaccagatgaccccgtg
ttccctttggcagtactgcagtcagtcggtgttgcactgacgcatgtacctgtgcagcag
ctaacccaaaactcgttgccaccgcgcttcatagcggaccagaagacgaacctgccagag
cctcttcaaacactcctcaacactttctgtcctctgctcctgtttaaggccagacctctt
cagatcgccgtctaccacatattggaaaaggtcatgcctcagctgcccgagtgtgatgga
gaaggcgacaacaataaatctgacgacgacagagatgagccatgcctgtctcctccagcg
tctctgatggccatcctgtcaacctgtgaagagctgtgtgataacatcctgtcaggcatt
caggtgggagagtttgcagtagtccagcctctcagtgtggagtactcctgcatactagga
tacttgctgtcctggaagctgcttctcactttttttaaatcctcatcgtcgcatctgcgt
gccaattatgcccagtaccttaagagaagctgctcccttaacaaactccttctccacgtc
ttcaaactgatgcccgagaacccggcctatccgggccaggaggcagaggcgagggagact
aaaaccttcttcacagagagcctgaatctggctgttgacaagtgtgacagtgttgagtgg
gagctccctcacctggcttgcagtgtgtactacagcacagtgcaagacctgcctgccatg
gttcgactgtggtggaatagccaggagaagagagtgagcgcagccgtggagaagttcacg
attaaatacatcagtcctgttctctcagcccaggagatctcatctgtccacaccagcact
caaatgtttgacagcatgactgtcaaggcccgctcagcagcacgggaggtgattgccacc
tattctgtggatgatatcttcattgagttggtgattcagcttccacagaattaccctttg
ggttctattgctgtggagagtgggaggcgtgtgggtgttgccgtgcagcagtggaggaac
tggatgctacagctgagcacctacctaacacatcagaatggcagtataatggagggtctg
gctctgtggaagaacaatgtggataagcgttttgagggaatagaggactgcatgatctgc
ttctccgtcatccacggatccaactactctctgccgaagaaggcttgccgcacatgcaaa
aagaagttccactctgcgtgtttgtacaaatggttcacttccagcaacaagtccacctgt
ccactctgcagagagaccttcttttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (50)   
   KEGG ORTHOLOGY (1)   
   RefGene (46)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (11)   
   Pfam (11)   
All databases (74)   

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