KEGG   Maylandia zebra (zebra mbuna): 101472637
Entry
101472637         CDS       T02814                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
mze  Maylandia zebra (zebra mbuna)
Pathway
mze03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mze00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    101472637 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mze03400]
    101472637 (xrcc1)
DNA repair and recombination proteins [BR:mze03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     101472637 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 101472637
NCBI-ProteinID: XP_004551108
Position
LG11:complement(22482173..22501184)
AA seq 627 aa
MPEIKLKHVVSCSTEDSTHRADNLLSSDTYRKWKAARPGEKQISVILQFEKEEQVHSIDI
GNEGSAFIEVLVGNSSAVRDQDYEVLLVMSSFMSPTESRSGTNMNRVRFFGPNQLQKSTA
QEKWDRVKIVCSQPYSKNIAYGLAFVKFHSPPDKNDPPPTSSPKLTKLGQFRVKDESPAS
GPSLQPGSLFFSRENATKSSTSLKASPQSEKISYAAAALQASGSSHSSGQASSSTSASPQ
PPAKRKFEFSKERQSAPGPPPSKKKSPSGSPEGKAATPKHKPSSVSTPSPSTAKASPVQK
AADRKSESESKPEPKTKQKAKSQKEQQVPFTRLMEGVVFVLSGFQNPFRGELREKALEMG
AKYRPDWTPDATHLICAFANTPKYSQVKSAGGIIVRKDWVLDCHKRKQKISYKRFLMDGP
ESSSESEMEADDESEEEMNTKTPQKKEKQVTAKKMPEKEEEDDEYAGSTDVDEPGGDDDE
SAVDTEDELQRVEEGRKQKKAATEGTVVKDEDPYGGSTDENTDAEAEEDHPIPELPDFLS
GKHFFLYGKFPNNDRRLLLRYIVAFNGVIEDYMTEKVQFVVTSEGWHDSFEDALMENTNL
NFVKPEWIYAISARQKMLPYQPYTVVP
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgccagaaatcaaactcaagcacgtcgtgtcgtgcagcaccgaggactctacgcacagg
gcagacaacctcctgagctctgacacgtacagaaagtggaaagcagccagacccggggag
aagcagatatcagtcattctccagtttgaaaaggaagagcaggtgcacagcattgatatt
ggaaatgaaggttcagctttcattgaggtgttggtggggaattcttcagctgtcagagat
caagactatgaggttctcctggttatgtcttccttcatgtcgcccacggagagccgcagt
ggcaccaacatgaaccgtgtgcgtttctttgggcccaaccagctgcaaaagagcacagct
caggagaagtgggacagagtgaaaattgtgtgtagccagccatacagcaagaatattgca
tatgggcttgcctttgttaagtttcattcgccacctgacaaaaacgatcctcctccaact
tcctccccaaaactgacaaagctgggacagttcagggtgaaggatgagtctcctgcatcc
gggcccagccttcaacctggcagtctcttcttcagtcgggagaacgcaacaaagtctagc
acttcactcaaagcgtctcctcagagtgagaagataagctacgcggctgctgctctgcaa
gcaagcggcagctcccactcatcaggccaggcctcgtcttccacctctgcctcaccacag
ccaccagcaaaaaggaaatttgaattcagcaaagagcgacaatctgctcccggcccccct
ccctcgaagaaaaaaagtccatctggttcacctgagggtaaagccgcaacccccaaacac
aagccgagttcagtcagtacacccagcccaagcacggccaaagcatcaccagttcagaag
gctgctgacaggaagagtgagagtgagtctaaacctgagcctaaaactaaacagaaggcc
aaatcccagaaagagcagcaggtcccattcacccggctcatggagggggtggtgtttgtc
ctcagtggatttcagaaccccttccgaggggagctgagggaaaaagcgctggaaatggga
gccaagtatcgacccgattggacgcctgacgccacacatcttatctgtgccttcgctaac
acccccaagtacagccaggtgaaatcagcgggtggaatcatcgtacgcaaggattgggtg
ctggattgccacaagaggaagcagaaaatctcctacaaaaggtttctgatggatggaccc
gaatcgagctcagagagtgaaatggaagcggacgacgagagcgaagaggaaatgaacaca
aagacgccgcagaagaaggagaaacaagtcacggccaaaaagatgccagagaaggaggag
gaagatgatgagtatgctggctccactgatgtggatgaaccaggaggcgatgatgatgaa
tctgcagtggacacagaggatgagctgcagagggtggaagaggggagaaaacagaagaaa
gcagcaacagaaggaacggtggtgaaggacgaggatccttacggggggtcgacggatgaa
aacactgacgctgaagctgaagaggatcatcccatccccgagctcccagatttcctaagc
ggaaagcactttttcctctacggtaaattccccaataacgacagacgactgctgttacga
tacattgttgcctttaatggagtgatcgaggactatatgacagagaaggtgcagttcgtg
gtgaccagtgaagggtggcacgactcctttgaagacgcgctgatggagaacaccaatctg
aattttgtcaaaccggaatggatttatgcaatcagtgcacgacaaaagatgctgccctat
cagccctacaccgtcgtcccctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (45)   

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