KEGG   Maylandia zebra (zebra mbuna): 101485101
Entry
101485101         CDS       T02814                                 
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
mze  Maylandia zebra (zebra mbuna)
Pathway
mze03020  RNA polymerase
mze04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:mze00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101485101 (polr3a)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    101485101 (polr3a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mze03021]
    101485101 (polr3a)
Enzymes [BR:mze01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     101485101 (polr3a)
Transcription machinery [BR:mze03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     101485101 (polr3a)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Bromo_TP
Other DBs
NCBI-GeneID: 101485101
NCBI-ProteinID: XP_004561310
UniProt: A0A3P9AT44
Position
LG8:14037714..14062314
AA seq 1402 aa
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTKHTPLAYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHVGYFKATIGILQMICKTCSRIMLTKE
EKLQFMDYLKRPNLAYLQKRGLKKKISDKCRKRTVCLNCSAFNGPVKKCGLLKIIHEKYK
TTKKVVDAFVSDFLQSFDIAIEHNKLVEPLLTRAQENLNPLVVLNLFRRISEEDIPLLLM
NPEAGKPADLIITRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELMRKLVRNGPDVHPGANF
IQNRHTQIKRFLKYGNREKIAQELRIGDLVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALILMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKACQIVASILVGKDERVRISLPHPAIIKPMALWTGKQI
FSLILKPSKECPVNANLRTKGKQYCGKGEDLCHNDSFVVIHNSELMCGSMDKSTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKQDLLDDG
YKKCDEYIEALDTGKLQQQPGCTAEETLEALILKELSVIRDRAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPNGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYTCPDEPALSQNELVLTADAIMKRADFLC
CRDSFLEELTDTGAEKYLEEIKKFIKSISERIKKTRDKYGINDNGTSEPKVLYQLDRVTP
TQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKNISTPIITAHLDVEDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICMSKLRVKPADIAVHGEAVVCVSPRENSKSSMYYV
LQSLKAELPKVVVQGIPEVARAVIHIDEQSSKSKYKLLVEGDNLRAVMATHGVNGSRTTS
NNTYEVEKTLGIEAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADR
DPSPVKRPLLFDNPDFHLSLIT
NT seq 4209 nt   +upstreamnt  +downstreamnt
atggtgaaggagcagttcagagagacagatgtggccaaaaaaataagccacatctgcttc
ggcatgaaatctgccgagcagatgcggcagcaggcccacatccaggtggtcagtaaaaat
ctctacagccaggacaccaaacacactccactggcctatggagtgttggaccaccgtatg
ggcaccagtgagaaagacagaccgtgcctgacatgtgggaagaatctggctgattgttta
ggacattatggctacctggatcttgagctgccctgttttcatgttggttatttcaaagcc
acaataggaatcttacagatgatttgtaagacatgttcaaggataatgctgacgaaagaa
gagaagctgcagttcatggattacttgaaacggcctaacctggcctacctccagaaacgt
gggctgaagaagaaaatctctgataaatgccgcaaaaggacagtctgtctaaattgttct
gctttcaatggaccagtcaaaaagtgtggcctacttaagatcatccatgagaagtataag
acgaccaagaaagtggtggatgcttttgtgtcagatttcttgcagtcctttgatattgcc
attgaacacaacaaactggttgagccactactgaccagagcacaggaaaacctgaatcct
ctggtggtgctgaacctgttcaggaggatttctgaagaggacatccctctgctgctgatg
aaccccgaagcagggaaacccgcagaccttatcatcacccgtctccttgtgcctcctctt
tgcatccgaccgtctgttgtcagcgacctcaagtctggcaccaatgaagacgacctcact
atgaagctaacagagataatcttccttaacgatgtcattaaaaagcatcgtatgacagga
gcaaaaacccagatgatcatggaggactgggacttcctccagctgcagtgtgccctttac
attaatagtgaactttctggtatccccctcaatatggcacctaaaaagtggactaggggc
tttgtgcagaggctcaagggaaagcaaggtcgattcagaggaaacctctctggcaaaaga
gtggacttctctggcagaactgtcatttctccagacccaaacctgaggattgatgaggtg
gctgtccctgtgcatgtggccaaaatcctgacatacccagagagggtaaacaaagccaat
ctggagctaatgaggaaactggtccgtaatggtcctgatgttcaccctggagccaacttc
atacagaacagacacactcagataaaaaggtttttaaaatatggaaaccgtgaaaagatt
gcccaggaactgaggattggtgatttggtggaaaggcacctaatagatggagacatcgtc
ctcttcaatcgacagccttctctgcacaaactcagcatcatggctcacattgccagggtc
aaacctcacaggacatttcggtttaacgagtgtgtgtgcacgccatacaacgctgacttt
gacggggacgaaatgaatctccatctacctcaaactgaagaagctaaagctgaggctctt
atcctcatggggaccaaagctaatcttgtcactccaagaaatggcgaacccctgattgct
gctattcaggacttcctgacaggtgcttacctcttgacgctgaaggacaccttctttgac
agatcaaaagcctgccaaatagtagcgtcaatccttgtgggtaaagatgaaagagttagg
atctctctccctcacccggccataataaagcccatggctctgtggacaggaaagcaaatc
ttcagcctaatcctgaagccaagtaaggaatgtccagtcaatgccaacctacgcaccaag
ggcaaacagtactgcggcaagggagaggacctttgtcacaatgattcgtttgtggtgatt
cacaacagtgagctgatgtgtggtagcatggataagagcaccttgggatctggctcgaag
aataacattttctacatcctgctgagggactggggacagctggaggctgccaacgccatg
tctcgcttggcaagacttgctcctgtgtatctctcaaacaggggtttctctattggaatc
ggggatgttacaccaggccagggtctgctgaaggctaagcaggacctgttggatgatggc
tacaagaagtgtgacgaatacatcgaagctttggacacgggcaagttgcagcagcagcca
ggctgcacagcagaagaaaccctggaggctctcatcttgaaagagctgtctgtcatcaga
gaccgagctggtagtgcctgtctaagggagctggacaagagcaacagccctctaattatg
gctctctgcgggtccaaaggatccttcattaatatatctcagatgattgcctgtgtgggc
cagcaggccataagcggctctcgggtacctaatgggtttgagaatcgctccctgcctcac
tttgaaaaacactcaaaactgcctgctgctaaagggtttgtggccgacagcttctattcc
ggtttgacacccacagagttcttcttccacaccatggctggtcgagagggtctggtggac
actgcggtgaaaactgcagagactgggtacatgcagaggcgtctggtgaagtctctggag
gatttgtgctcacagtatgacctcacagtacgcagttcaacaggcgacatcatccagttc
atttatggtggtgatggcctggaccccgctgcaatggaggggaaggatgagccactggag
tttaagagagtcctggacaacattcgggcggtctacacgtgtccagatgagcctgcactg
agtcaaaacgagctggtcctcactgcagacgctatcatgaaaagagctgacttcttatgc
tgtagagacagcttcttggaggaattaactgacacaggcgcagagaagtacctggaggaa
ataaagaaattcattaagagcatttcagaaaggatcaagaagactagagacaagtacggc
atcaatgacaatgggactagtgagccaaaggttctttatcagctggatcgtgtaactcct
acccagctggagaagtttcttgaaacctgcagagacaaatacatgagagctcagatggag
ccaggatcagcagttggggccctttgtgcccagagcattggagagccgggtactcaaatg
acactaaaaacctttcactttgccggtgttgcatcaatgaatatcactctaggagtgcct
cgcatcaaagaaatcatcaacgcctccaagaacatcagcactcctataatcacggctcat
ttggatgtggaagatgatgctgactttgccaggctggtgaaggggagaattgagaagact
cttctaggagagatttctgagtacatagaagaggttttccttccagatgactgtttcatc
ttggtgaagctgtcactggagagaataagactgctgcgactggaggtaaatgcagaaacg
gtgcgttactccatctgcatgtctaaactgcgagtcaaaccggcagacatcgctgtacac
ggggaggcggtggtgtgcgtgtctcctcgagagaacagcaaaagctccatgtactatgtg
ctgcagtcactaaaagcagaacttcccaaggtggtggttcaagggataccggaggttgcc
cgagctgtcattcatattgacgaacagagcagcaagagtaagtacaaactcctggtggag
ggggacaacctgagagcggttatggcgacacatggcgtgaacggaagtaggaccacttca
aacaatacttatgaggtcgagaagaccttgggcattgaggctgctagatccacaatcata
aacgagattcagtacaccatggtgaaccacggaatgagcattgaccgacgtcacgtcatg
cttcttgcagatctcatgtcctataagggtgagatcctgggaatcaccaggtttggttta
gcaaaaatgaaggagagtgtcctcatgctggcttcttttgagaagacagccgatcatctc
tttgatgctgcctattttggacagaaggactcagtttgtggtgtgtctgagtgtatcatc
atggggattccaatgaatattggaacaggactatttaaactgcttcacaaggctgacaga
gatccctctccagtcaaaaggcctctcctctttgacaatccagacttccatttatctttg
atcacatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (52)   

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