KEGG   Nocardia asteroides: NCTC11293_05146
Entry
NCTC11293_05146   CDS       T06742                                 
Symbol
hrdB_3
Name
(GenBank) RNA polymerase principal sigma factor hrdB
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
nad  Nocardia asteroides
Brite
KEGG Orthology (KO) [BR:nad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nad03021]
    NCTC11293_05146 (hrdB_3)
Transcription machinery [BR:nad03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NCTC11293_05146 (hrdB_3)
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: VEG36796
Position
1:5450534..5451502
AA seq 322 aa
MTSPATTRVRPSESDIDAQSPAADLVRVYLNGIGRTALLTAADEVELAKRIEAGLYAQHL
LETGKRLSATRKRDLAILVREGQAARSHLLEANLRLVVSLAKRYTGRGMPLLDLIQEGNL
GLIRAMEKFDYAKGFKFSTYATWWIRQAITRGMADQSRTIRLPVHLVEQVNKLARIKREL
HQQLGREATDAELANESGIPVEKIADLLDHSRDPVSLDMPVGNDEEAPLGDFIEDSEATS
AESAVIAGLLHHDVRSVLATLDEREQQVIRLRFGLDDGQPRTLDQIGKLFGLSRERVRQI
EREVMSKLRKGERADRLRAYAS
NT seq 969 nt   +upstreamnt  +downstreamnt
atgacaagccccgccactactcgtgtgcgccccagcgagtccgatatcgacgcccagagc
cccgccgccgacctggtacgcgtgtacctgaacggaatcggtcgcacggcactgctcacg
gcggccgacgaggtcgagctggccaagcgtatcgaggcgggcctgtatgcccagcacctg
ctcgagaccggtaagcggttatcggctacccgcaagcgtgatctggcgattctggtccgc
gaggggcaggccgcccgctcgcacctgctcgaggccaacctgcgcctggtcgtgtcgctg
gccaagcgctacaccggccgcgggatgccgctgctcgacctgatccaggagggcaacctc
gggctcatccgcgccatggagaagttcgactacgccaagggcttcaagttctccacctac
gccacctggtggatccgccaggccatcacccgcggtatggccgaccagagccgcaccatc
cggctccccgtgcacctggtcgagcaggtcaacaagctcgcccggatcaagcgtgaactg
catcagcagctcggccgcgaggccaccgacgccgaactcgccaacgagtcgggcatcccg
gtggagaagatcgccgacctgctcgaccacagccgcgacccggtgagcctggacatgccg
gtcggcaacgacgaggaagccccgctgggcgacttcatcgaggactccgaggccacctcg
gccgagagcgccgtgatcgccggcctgctgcaccacgacgtgcgcagcgtcctggccacc
ctcgacgagcgcgagcagcaggtcatccgcctgcgcttcggcctcgacgacggccagccg
cgcaccctcgaccagatcggcaagctgttcgggctgtcccgcgagcgggtccgtcagatc
gagcgcgaggtcatgtccaagctgcgcaagggtgagcgcgccgaccggctgcgcgcctac
gccagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (9)   

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