KEGG   Candidatus Nucleicultrix amoebiphila: GQ61_03325
Entry
GQ61_03325        CDS       T04833                                 
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
naf  Candidatus Nucleicultrix amoebiphila
Brite
KEGG Orthology (KO) [BR:naf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:naf03016]
    GQ61_03325
Enzymes [BR:naf01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     GQ61_03325
Transfer RNA biogenesis [BR:naf03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    GQ61_03325
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM TRAM_2 B12-binding
Other DBs
NCBI-ProteinID: ARN84511
UniProt: A0A1W6N413
Position
complement(671350..672717)
AA seq 455 aa
MVLSKRLYIKTYGCQMNVYDSEKMEALLKPLGYAVTDAPESADMVILNTCHIREKATEKA
YSDMGRMRELKNERQALGKDMIIAVAGCTAQAEGEQILNRAPYVDMVFGPQSYHLLPEML
AKATRSVEKGKGPGCGVLEVDFPEVPKFDFLPEPTEISGPSTFLAIQEGCDKFCHFCCVP
YTRGAEYSRPVQDIFKEAKALVVKGAREITLLGQNVNAYHGEAPSNKGEWGLGELSRYLA
EIEGLERIRYMTSHPRDVDEALIQAHRDVPQLMPFLHLPVQSGSDVILKAMNRRHTSQFY
LDIIAKFRSVRPDIAFSSDFIVGYPGETDQDFEATLDLVRQVNFAQAYSFKYSPRPGTPA
AALENQIDEKLKSERLQILQDLLREQQAHFNRNMIGKKLAILLEKVGRHQGQLIGRSPFL
QSVHIKAPAQLLGEIVEVEITSGETNSLAAKLIAT
NT seq 1368 nt   +upstreamnt  +downstreamnt
atggtcttgagtaaacgtttgtatattaagacttatggttgtcagatgaatgtctatgat
tctgagaaaatggaggcattgcttaagcctttaggctatgctgtcacagacgctcctgaa
tcagcagatatggttattctaaatacatgtcatattcgtgaaaaagctacagaaaaagca
tattctgatatggggaggatgagagaattaaagaacgaacgtcaagctcttggcaaagat
atgattattgctgttgctggatgtacagctcaggctgaaggagagcaaatacttaatcgt
gcaccatatgtagatatggtttttggtccacaatcctatcatctgttacctgaaatgctt
gcaaaagcaacacgttcggttgaaaaaggaaaaggtcctggatgtggcgttcttgaagtt
gattttcccgaggtcccaaaatttgattttttgcctgagccgactgaaatctcaggacca
agcacttttctcgctatacaagaaggatgtgataaattttgtcacttctgttgtgttcct
tatacgagaggagctgagtattcccggccagttcaagatattttcaaagaagccaaagca
ttggttgttaaaggtgctcgtgaaatcacccttttagggcagaatgtgaatgcttatcat
ggagaggcaccttcgaacaaaggtgaatgggggttaggggagctatctcggtatttagct
gaaattgaaggacttgagaggattcgctacatgacttctcatccaagggatgttgatgaa
gctctgattcaagcacatcgagatgttcctcaattgatgccttttcttcatttgcctgta
cagtctggatcagatgtaattttgaaagctatgaatcgccgtcatacgtctcaattttat
cttgatattattgctaagtttcgttctgtgcgtcctgatatagcgttttcctcggatttt
attgtaggttatccaggagagactgatcaagattttgaagcgacacttgatcttgtgcgt
caagtgaactttgcacaagcttattcatttaaatatagccctcgtcctggaacacctgct
gcagcgcttgagaatcaaattgatgaaaaattaaaatcagagcgtttacaaatacttcaa
gatcttttgagggaacaacaagctcacttcaatcgtaatatgattgggaaaaagttagct
attttactggaaaaagttggtcgacatcaaggccagctgattggtcgtagcccttttctc
caatctgtgcacataaaggcgcctgcacaacttcttggagagattgtagaagttgaaatt
acttctggagaaacaaatagccttgcagctaaacttatagcaacataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (74)   
   KEGG ORTHOLOGY (1)   
   RefGene (71)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (96)   

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