KEGG   Necator americanus (New World hookworm): NECAME_06189
Entry
NECAME_06189      CDS       T04867                                 
Name
(RefSeq) DNA topoisomerase
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
nai  Necator americanus (New World hookworm)
Pathway
nai03440  Homologous recombination
nai03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:nai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    NECAME_06189
   03460 Fanconi anemia pathway
    NECAME_06189
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nai03032]
    NECAME_06189
   03400 DNA repair and recombination proteins [BR:nai03400]
    NECAME_06189
Enzymes [BR:nai01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     NECAME_06189
DNA replication proteins [BR:nai03032]
 Eukaryotic type
  DNA Topoisomerases
   NECAME_06189
DNA repair and recombination proteins [BR:nai03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     NECAME_06189
   FA (Fanconi anemia) pathway
     NECAME_06189
SSDB
Motif
Pfam: Topoisom_bac Toprim
Other DBs
NCBI-GeneID: 25346221
NCBI-ProteinID: XP_013308102
UniProt: W2TUU8
Position
Unknown
AA seq 890 aa
MSSATVMMVAEKPLLADSIAKILSNNTASKRKGRNGVCSVSEYRGQFQGKPAFFKVTSTC
GHVMSLDFPSKFNNWERVDPMELYTAPTNKIEANPKMHMNDYLAFEAKGADYLVLWLDCD
KEGENICFEAVSIFCLDFYYTFMLLHDNFISTACVLQVIDAVSNSMKRPRDGDFMKSVYR
AHFSAITDKDIKAAMQNLVRPNRNEAMSVDARQELDLRVGCSFTRFQTKFFQLNEEMFQN
KYGDLDSTVISYGPCQTPTLGFCVSRHDQITHFKPEPYWLLQCVFETATGLLVRPEWKRG
RIFDRDVAQLFLDRVKNAGRGAVTDVSTKEGRKERPLALNTVELMRIASSAFGLSPATTM
SVAEQLYTQGYISYPRTETTAYSANFDLKGTLQQQSNNSKWGDVVKKVLNEGIRRPRGGE
DKGDHPPITPMKPNNGQLSGDMARIYDYVVQHFVATLMGPCIFDVTTIVISSGEESFTLT
GKTLKDPGFTEVMTWLNVDDCEKLPPLVRGDQLSLKEVSLAARETSPPGYLTESELISLM
EKHGIGTDASIPVHINTICQRNYVTVESGRRLVPTRLGISLVHGYWRVDRELVLPTMRAE
VETQLNLIAQGKADYHACGTVFLSSNFGGTLHHIINHSRNFEISASFTSLSESGKPFSRC
GKCRRYMKLVATKPQRLFCSTCQETYSVPNARDGILRPFGEKKCPLDDFELVYWNGSGGK
LARSFALCPFCYNNPPFESMKEAEGCSNCPHPACPHSYMTTGVCGCLQECGGVMVLDPQS
HPKWRLTCNKCPSVVAMFEGALKFRVTEACCAECDAKIVSVEYKDKSPLPDEKNTFKGCM
FCSETVKGLVNLHHAFRNEEDQQRQMFQRGRGRGRGRGRGRGASRSGRGR
NT seq 2673 nt   +upstreamnt  +downstreamnt
atgtcttctgccaccgtcatgatggtggccgagaagccacttcttgctgattcaattgcc
aaaattctttcgaacaatactgcttctaaacggaaaggtcgaaatggagtttgctccgta
agcgaatatagaggtcaattccaaggaaaacctgccttcttcaaggtcacgagcacatgt
ggacacgtaatgagcctcgatttccccagtaaatttaacaattgggagcgcgtagatccg
atggagttgtacacggctcctaccaacaaaattgaagcgaatccgaagatgcacatgaac
gactatctggctttcgaagcgaaaggcgccgactacctcgttctgtggctcgactgcgac
aaggaaggagaaaatatctgcttcgaggcagtttctatattttgtcttgatttctactat
acttttatgctactacacgataattttatatccactgcttgcgtattacaggtcattgat
gctgtcagcaattctatgaagcggcctcgggatggcgacttcatgaaaagcgtctatagg
gcacacttctccgccatcaccgacaaggatatcaaagccgctatgcaaaatcttgtgcgt
cccaatcgtaacgaagcgatgtccgtagacgctagacaggagctggatctccgtgtcggt
tgctcattcactcgattccaaacgaaattctttcagctgaatgaagaaatgtttcagaat
aagtacggagatttggacagcactgttatatcgtatggaccatgtcagacgcccactctg
gggttctgcgtcagtcgtcacgatcagatcacacacttcaagcccgaaccttactggcta
ctgcaatgtgtgtttgaaaccgcaacaggattgcttgttcgacccgagtggaaacgaggt
agaatattcgacagagacgtggctcaactgttcttggatcgtgtcaaaaatgcgggacga
ggagctgtgacagatgtgagcacaaaggagggaagaaaggagcgaccgctggcgcttaac
actgtggaactgatgagaatcgcaagtagcgcatttggactgagccctgcgacaacgatg
agtgtggctgagcagctctacactcaaggctacatctcctatccaagaactgaaaccaca
gcgtactctgccaatttcgacttgaaaggaactctccaacaacagtcgaacaattcaaag
tggggagacgtcgtgaaaaaggttctgaatgaaggtattcggcggcctcgtggtggcgag
gataaaggtgatcatcctcctattacaccgatgaaacctaataatgggcaactttctgga
gacatggctcgaatttacgactacgttgttcagcactttgtcgcgacgttgatgggacca
tgtatcttcgatgtgactactattgttatttcttctggagaagagtcattcacattgact
ggcaaaacgttgaaggatccaggttttacggaggtcatgacatggttgaatgtcgacgat
tgtgagaagctgccaccacttgtccgtggagatcaactttcgctgaaagaagtttccttg
gctgctcgtgaaacatctccaccgggttatctaactgaatcagagttgatatcattaatg
gaaaagcatggaataggcacggatgcctcaatccctgtgcatataaataccatctgtcag
aggaactatgttactgtggaaagtggtcgacgattggtgccaactcgtcttggaatctca
cttgttcatggatattggcgagtagaccgtgaacttgtgctaccaactatgagagccgag
gtagaaacacaactcaacctcattgcgcaagggaaagcggactaccatgcatgtggaact
gtttttctctcgtccaacttcggtgggacccttcatcatataattaatcattcaagaaat
tttgaaatttcagcctccttcacctcactgtctgaatccgggaaaccattctcccgttgc
ggaaaatgtagaagatatatgaaactcgtggctacaaaaccgcaacgtctattttgttca
acgtgccaggaaacatactctgtgccgaacgcgagagacggaattcttcgcccattcggt
gaaaagaagtgcccacttgacgattttgagctggtgtactggaacggttctggaggaaaa
cttgcacgaagtttcgcgctctgtcccttttgttacaataatccaccctttgagtcaatg
aaagaagcagaagggtgctctaactgtcctcatccagcttgcccacactcatacatgaca
actggcgtatgcggatgcttacaagagtgcggtggtgttatggtattggatcctcaatcg
catccaaaatggagactgacatgcaacaaatgtccatctgtggtcgcaatgttcgaaggg
gccctgaagttcagggttacggaggcatgttgtgctgaatgcgacgcaaaaattgtttcc
gtcgaatacaaggataagagtcctctgccggacgagaagaacacattcaaaggatgcatg
ttctgtagcgagactgttaaaggattggtgaatctgcatcatgcattccgcaacgaggag
gatcaacagcgccaaatgttccaacgaggtcggggacgaggaagggggcgtgggcgaggc
cgaggtgcttctagaagtggcaggggaagatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (57)   

Download RDF
DBGET integrated database retrieval system