KEGG   Necator americanus (New World hookworm): NECAME_12518
Entry
NECAME_12518      CDS       T04867                                 
Name
(RefSeq) hypothetical protein
  KO
K12571  PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
Organism
nai  Necator americanus (New World hookworm)
Pathway
nai03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NECAME_12518
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nai03019]
    NECAME_12518
Enzymes [BR:nai01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     NECAME_12518
Messenger RNA biogenesis [BR:nai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     NECAME_12518
  mRNA degradation factors
   3'-5' decay
    Pan complex
     NECAME_12518
SSDB
Motif
Pfam: UCH_1 PAN2_N UCH zf-CCCH_2 Ribosomal_S5
Other DBs
NCBI-GeneID: 25352546
NCBI-ProteinID: XP_013297287
UniProt: W2SZA3
Position
Unknown
AA seq 702 aa
MQNLTAMGRISGTSSLFLGGDQKKLIQFDYEKQKEIRVAGIKEKNANIIKVNGSQLFTAD
SEGKITLRSLGSMEALRVIPAHNGIITDFDVSGNRLITCGCSIRQGLPHGDPYVKVYDLR
SFAALPPIALSFAPSFTRFLSMPAFCDNRILSVGQNGQAQMMFLNERGAGMPLIVDTGGY
HLTTFGFSSTKHYLAFADEIGNIHVYADRPNPTINDSSWETDFADPSLGPPQSFLIDDTH
TPLAAVPLPFSCDDSYFSDWPEEFCLNVYRKPKPVPVPPSLSTIQFVGYVANPRANTPLA
RFNVVPYCQDGQEDCEVVDPGPVIIPQFYRKLELRRSRSGRLDDTSILKYNKTDYAPMEV
ITSSCIINPIVLILFHVSALRNLILSHICDDEHCIACQLGFVFRIISDKSKSKETASCTN
LIRSLLVTRGSDVVGPVQTTTQCLFSSVVNSINKSLKNEENETLANILESELTVLSRCIR
CGELNASDEKKIVLSLNYPEAANERNMSYLLEKALHAKGQHEGPCASCNVTTRMDDTRRV
QRLAPILLIDTNPSHPKFAEFWEKQLKFSESRPRYRAPDKECVLDGGARAERPCRYGADC
RNRTYCKYSHGTDDWDMECAAWLEDSGCGDWKHFVSPSFCARVANGLAILNEKPMEGECE
QYELVAMVYAIGNGNGQWTHSVAMIKDDIDVLVQRFCGFLWM
NT seq 2109 nt   +upstreamnt  +downstreamnt
atgcagaatcttacagcaatggggcgtataagtggtacatcatcactgtttctgggagga
gaccaaaagaaactcatacaattcgattatgagaagcaaaaagagatccgcgtggcaggt
atcaaggagaagaacgccaacataataaaagtgaatggatcgcagttgttcaccgctgat
agtgaaggcaagataaccttacgatcattggggagtatggaagctctacgagtaatacct
gcacacaatgggattataactgattttgatgtcagtgggaacagactaataacttgtgga
tgttcaataagacaaggtcttccgcatggcgatccatacgtgaaggtgtacgatttgcgt
agctttgccgcactaccacctattgcgctgtcgtttgccccttcgtttactagattctta
tcaatgccagctttctgcgacaatcgaatccttagtgttggccagaacggccaagcccaa
atgatgtttttgaacgaacgcggtgctggaatgcctttgatagttgataccggtggatat
cacttgacaacattcggcttttcgtcaactaagcactatttggcatttgcagatgaaatc
ggaaacattcatgtttatgctgatagacctaatcctacaatcaacgactcttcttgggaa
actgattttgctgatccttcgcttggaccacctcagtcgtttctcattgatgacactcac
acacctttagctgcagttcctctgccattctcgtgtgatgacagctatttctcagattgg
ccggaagaattttgcctgaacgtgtataggaaacccaagcctgttcctgttccaccgtcg
ttgtctacgatccaatttgttggttacgttgcgaatcctcgcgctaacactccacttgcc
cgtttcaatgtcgtaccttactgtcaggatggtcaagaggactgtgaagttgtcgacccc
ggacctgtcataattcctcagttttaccgcaaactggagcttcgacgctcacgaagcgga
cgtcttgacgatacctccatcttaaaatacaacaagacagactacgcaccgatggaagta
atcacctccagctgtataataaacccaatagtgctgatattgttccatgtttctgctctt
cgtaatcttattctatcccatatttgcgacgacgagcactgcatagcttgtcagcttggc
ttcgtcttcagaataatcagcgacaaaagcaaatcaaaggagaccgcatcttgcacgaac
ttgatccgttcacttcttgtaaccagagggtcggatgttgttggaccagttcagacaaca
acacagtgtctgttctcgagtgtcgtcaactcgatcaacaagtcgttgaaaaatgaagaa
aatgagaccttagccaacatattggagtctgaattaacggtactgtcaagatgtatacgc
tgcggtgaactgaacgcctctgatgaaaagaagattgttctttccttaaactaccctgaa
gcggcgaatgagcggaacatgagctatttgttggagaaagctttgcacgctaaaggacaa
catgaagggccatgcgcatcatgcaatgttacgacacgaatggatgataccaggagggtg
cagagactagcacctatactactaattgatacgaatccatctcatccgaagttcgcagag
ttttgggaaaaacaacttaaattttctgaatcacggcctcgttatcgagctccagacaag
gaatgtgtcttagatggtggagcccgtgccgagagaccatgtcgttatggggctgactgt
agaaacagaacatattgcaagtattcgcatggaactgatgattgggacatggaatgtgct
gcttggctcgaagactctggttgtggtgattggaaacactttgtttcaccttcattctgc
gctagggtagcgaatggtctggctattctgaacgaaaagcccatggaaggtgaatgtgaa
cagtacgaactggtagccatggtttatgctataggtaatggcaacggccagtggacacat
tccgtcgcgatgattaaggacgacatagatgtgttggttcaacgtttttgtgggtttttg
tggatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

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