KEGG   Nocardiopsis alba: B005_2022
Entry
B005_2022         CDS       T02218                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
nal  Nocardiopsis alba
Pathway
nal03030  DNA replication
nal03430  Mismatch repair
nal03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B005_2022 (dnaX)
   03430 Mismatch repair
    B005_2022 (dnaX)
   03440 Homologous recombination
    B005_2022 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nal03032]
    B005_2022 (dnaX)
   03400 DNA repair and recombination proteins [BR:nal03400]
    B005_2022 (dnaX)
Enzymes [BR:nal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     B005_2022 (dnaX)
DNA replication proteins [BR:nal03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     B005_2022 (dnaX)
DNA repair and recombination proteins [BR:nal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     B005_2022 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA AAA_22 AAA_30 RuvB_N AAA_14 AAA_18 AAA_16 Rad17 AAA_19 nSTAND3 Mg_chelatase AAA_28 RNA_helicase
Other DBs
NCBI-ProteinID: AFR07870
UniProt: J7L8U7
Position
2094038..2096200
AA seq 720 aa
MSIALYRKYRPATFGEVRGQEHVTDPLRQALRSGRINHAYLFSGPRGCGKTTSARILARS
LNCAEGPTPDPCGTCDSCVSLAPDGGGSIDVIEIDAASHGGVDDARDLRERAFFSPVNSR
YKIYIIDEAHMVTREGFNALLKLVEEPPPHLKFVFATTEPEKVIGTIRSRTHHYPFRLIP
PSTLKELMEDLLKEEEVTYDPAALPLVVRAGAGSARDTLSVLDQLIAGSDEGGITREGAV
SLLGYTDSSLLGEMVDALGARDGAAAFGLVDRVVEGGHDPRRFTTDLLERFRDLVVLSAV
PDAIDKGLVNVSPESVDQMKEQAARLGPAELSRAAEVLNQGLTEMRGATAPRLLLELLCS
RILLPATDGDQGVALLARLEQMERRVASGAIAPQASAPAPAPAAPAPVRQPSPPQPAAPA
SQAAPPQQPARTEAPEPAPRQAPRPSQPASRNEPSGWDAPAPAPAEPRPAAPASGGPLDL
GRLQGAWHQVMEAVKGRRRFTWMMLHGGDVQPVGVEGNTVLLGFSKPNEAKGFTTSGSDQ
VVAGAIQQVLGAEVRVAPAGVGGPPAPPRRPEPAPRPAEPSGWDAPPVRNEPAPVQARPE
PAPEPERPAGPPPERLLSDRPEPPPDPYEDAAAAPPPEDHGSPAPVRNAGPGNGRPEESA
PREERPANAPAPRPASAGAASAGPSPSGGSGNGGGGVSLIETELGGKLIEEIEHEPSEGF
NT seq 2163 nt   +upstreamnt  +downstreamnt
gtgagcatcgcgctgtaccgcaagtaccgtcccgcgacgttcggcgaggtgcgcgggcag
gagcacgtgaccgacccgctgcgccaggcgctgcggagcggacgtatcaaccacgcctac
ctcttcagcgggccgcgtggttgtggcaagaccaccagcgcgcggatcctcgcgcgttcc
ctcaactgcgcggagggacccaccccggatccatgcggcacctgtgactcgtgtgtgtcg
ttggcccccgacggcggcggcagcatcgacgtgatcgagatcgacgccgcctcccacggt
ggtgtcgacgacgctcgtgacctgcgtgaacgtgcctttttttcgccggtcaactcgcgc
tacaagatctacatcatcgatgaggcgcacatggtgacccgtgagggtttcaacgcgctg
ctcaagctcgtcgaggagcccccgccgcacctgaagttcgtgttcgcgaccaccgagccc
gagaaggtcatcgggacgatccgttcgcgcacccaccactaccccttccggttgatcccg
ccgagcaccctcaaggagctcatggaggacctcctcaaggaggaggaggtgacctacgac
ccggccgcgcttcccctggtggtgcgcgcgggggcggggtcggcgcgcgacaccctgtcg
gtcctggaccagctcatcgccggttcggacgagggcggcatcacccgtgagggcgccgtc
tccctgctcggctacaccgactccagccttctgggcgagatggtcgacgccttgggcgcc
cgggacggtgcagcggcgttcggcctggtggaccgggtagtggagggcggccacgatccg
cgccgcttcaccaccgatctgctggagcgcttccgtgacctggtggtgctctcggcggtg
ccggacgccatcgacaagggcctggtgaacgtctctccggagtcggtggaccagatgaag
gagcaggccgcccggttggggccggccgagctctcccgcgccgccgaggtgctcaaccag
gggctcaccgagatgcgcggtgcgacggcgccgcgtctgctcctcgaactgctgtgctcg
cggatcctgctgccggccaccgacggggaccagggtgtcgcgctgttggcccggttggag
cagatggaacgtcgagtggcctcgggtgcgatcgccccgcaggcctcggctcccgccccg
gccccggcggctccggcccctgtgcgtcagccctctccgcctcagcctgcggctcccgcc
tctcaggccgcgccgcctcagcagccggcccgcacggaggcccccgaacccgcgccgcgg
caggccccccggccttcgcagcccgcctctcggaacgagccgtcggggtgggacgccccg
gccccggctccggccgagccccgtccggcggcgcccgcctccggtggcccgttggacctg
ggacgtctccagggggcctggcatcaggtgatggaagcggtcaagggccgtcgccggttc
acctggatgatgctgcacggcggcgacgtgcagccggtgggcgtcgagggcaacacggtg
ctgctcggtttctccaaaccgaacgaggccaagggcttcaccaccagcggcagcgatcag
gtggtggcgggtgcgatccagcaggtgctgggcgccgaggtccgtgtggccccggcgggt
gtgggcggtccgccggctccgccccgccgccccgaaccggccccgcgcccggcggagccc
tcggggtgggacgcgcctccggtacggaacgaacccgccccggtccaggcccgtccggaa
ccggctccggagcccgagcgtcctgcggggccgccgccggaacggctgctcagcgaccgt
ccggagcctccgccggacccctatgaggacgccgcggccgccccgccgcccgaggaccac
gggtccccggcccccgttcggaacgccggccccgggaacgggcgtcccgaggagagcgcg
ccccgtgaggagcggcccgcgaacgctccggcccctcgtccggcctccgccggcgcggcc
tcggccggcccctccccttccggtgggtccgggaacgggggcgggggtgtctctctcatc
gagaccgagctgggcggcaagttgatcgaggagatcgagcacgagccttccgaagggttc
tag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (28)   

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