KEGG   Nocardiopsis alba: B005_3796
Entry
B005_3796         CDS       T02218                                 
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
nal  Nocardiopsis alba
Pathway
nal00470  D-Amino acid metabolism
nal00550  Peptidoglycan biosynthesis
nal01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:nal00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    B005_3796 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    B005_3796 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:nal01011]
    B005_3796 (murD)
Enzymes [BR:nal01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     B005_3796 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:nal01011]
 Precursor biosynthesis
  Amino acid ligase
   B005_3796 (murD)
SSDB
Motif
Pfam: Mur_ligase_M MurD-like_N Mur_ligase_C Mur_ligase NAD_binding_2 Shikimate_DH TrkA_N KR adh_short
Other DBs
NCBI-ProteinID: AFR07295
UniProt: J7L768
Position
3983212..3984681
AA seq 489 aa
MPHQGPSDTTPSPASVGDENPFADALVCVAGLGVSGPPVARALLARGARVVVVDGRDDET
TRRVAAELTEAGARVVLGETPLPEGCDLVVISPGWRPDSPLAERAAEAGVEVIGDVELAW
RLKPADQVWLAITGTNGKTTTVRMLESILRADGRDALAVGNVGTPIVDAVLPDAEGHVHD
ILAVELSSFQLHWSESLRPHAATVLNVAPDHLDWHGGLEPYARAKGRVFARGTLRVVNTA
DAWSVRLAEEEGDPHTPLVGIRSDTPRAGELGVVEDLLVDRAFVDEPHSSAEELATLADV
RPAAPHNVSNALAAAALARSVGVAADSVRAGLVAFVPEPHRIAHVARVAGVDYVDDSKAT
NPHAAAASLNSYPSVVWVAGGLLKGAEVDDLVSSAAHRLRGAVLIGADRARIREALDEYA
PEVTVVEVEGPAADAPEGHTVMDVVVAEATALAGEGDTVLLAPAAASMDMFTNYPERGRL
FAEAVHRLG
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgccgcaccaaggaccttccgacaccaccccgtccccggcctccgtcggggacgagaat
cccttcgcggacgcgttggtctgcgtcgccggtctgggcgtctccggaccccccgtcgcc
agggcactcctggcccggggggcccgggtggtcgtcgtcgacggccgggacgacgagacc
acccgtcgcgtcgccgccgagctgaccgaggccggagcccgggtcgtcctgggcgagacc
ccgctgcccgagggctgcgacctggtcgtcatctcccccggatggcgccccgactccccg
ctggcggaacgggccgccgaggccggtgtcgaggtcatcggcgacgtggagctggcctgg
cgtctcaagcccgccgaccaggtgtggctggccatcaccggcaccaacggcaagaccacc
acggtgcgcatgctggagtcgatcctgcgcgccgacggccgtgacgcgctcgccgtgggc
aacgtcggcaccccgatcgtggacgccgtcctgcccgacgccgaagggcatgtgcacgac
atcctcgcggtggagctgtccagcttccaactgcactggtccgagtccctgcgcccgcac
gccgccaccgtcctcaacgtggcccccgaccacctggactggcacggagggctcgaaccc
tacgcgcgggccaagggcagggtgttcgcgcgagggaccctgcgcgtggtcaacacggcc
gacgcgtggtcggtccggctggccgaggaggagggcgacccgcacaccccgctggtgggg
atccgctccgacacgccccgcgccggtgaactcggtgtggtcgaggacctgttggtggac
cgggccttcgtggacgagccgcacagcagcgccgaggaactggccaccctggccgacgtg
cgtccggcggccccgcacaacgtctccaacgccctggccgccgcggcgctggcccgttcg
gtcggcgtggcggcggactcggtccgtgccgggctggtcgccttcgtccccgagccccac
cggatcgcccacgtggcccgggtcgcgggcgtggactacgtcgacgactccaaggccacc
aatccgcacgccgccgcggcctcgctcaactcctacccctccgtggtgtgggtggcgggc
ggactgctcaagggcgccgaggtcgacgacctggtctcctcggcggcccaccggctgcgc
ggcgcggtgctgatcggcgccgaccgggcccgtatccgcgaggcgctcgacgagtacgcg
cccgaggtgacggtggtcgaggtcgaggggccggccgccgacgccccggagggacacacc
gtcatggacgtcgtggtcgccgaggccaccgccctggcgggcgagggggacaccgtcctg
ctcgcccccgccgcggcctccatggacatgttcacgaactaccccgaacgaggccgtctc
ttcgccgaggccgtccaccgtctgggctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (28)   

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