KEGG   Nautilia profundicola: NAMH_1695
Entry
NAMH_1695         CDS       T00860                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
nam  Nautilia profundicola
Pathway
nam03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:nam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NAMH_1695 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nam03021]
    NAMH_1695 (rpoA)
   03400 DNA repair and recombination proteins [BR:nam03400]
    NAMH_1695 (rpoA)
Enzymes [BR:nam01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     NAMH_1695 (rpoA)
Transcription machinery [BR:nam03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     NAMH_1695 (rpoA)
DNA repair and recombination proteins [BR:nam03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      NAMH_1695 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RNA_pol_L_2 JLPA T4_gp9_10
Other DBs
NCBI-ProteinID: ACM92734
UniProt: B9L6T7
Position
complement(1579960..1580952)
AA seq 330 aa
MNKIKTEVLIPSDVSFKEEGNKATIEVYPFEAGFGVSVAHPIRRTLIASTPGFAPIALKI
EGVKHEFDSLKGMLEDVASFIINLKNIRFKIKEGDEAVVDYVFVGPKEIKGSDLANDLVD
IVTPNEYIATLNEEAELKLTLIIRKGMGFVAVENFRDEIPEGFIGLDAYFSPIKKVVYNI
ENILVEDDPNFEKVIFEVETDGQISPIDAFKNAVNNYLNQFSVFSKEFKLEQKTSQSVEL
DEVYNVLFEPIENLNLRSRSFNALDRAGIRFVGELVLMGKEKISNIKNLGTKSLEEIFDK
LEEIGFPLNKTLPLDIKKAIEDKLSQLKEN
NT seq 993 nt   +upstreamnt  +downstreamnt
atgaataaaataaaaacagaagttttaattccaagcgatgtttctttcaaagaagaagga
aacaaagctacaatcgaagtatatccttttgaagcggggttcggggttagcgttgctcat
ccgattagaagaacgctaattgcttcaactccgggttttgcacctatcgctcttaaaatc
gaaggtgtaaaacatgagttcgactcattaaaaggcatgcttgaagatgttgcaagtttt
attattaaccttaaaaacatcagatttaaaattaaagagggcgatgaagcagtagttgac
tatgtgttcgtaggtcctaaagaaattaaaggtagcgatcttgctaatgatttagttgat
attgttacacctaatgaatatattgcaacattaaacgaagaagcggaacttaaactgact
ttaattatcagaaaaggtatgggattcgtagccgtagaaaacttcagagatgaaattcca
gaaggatttatcggacttgacgcatatttcagtccgattaaaaaagttgtttacaacatt
gaaaatatcttagttgaagacgatcctaattttgaaaaagttatttttgaagttgaaaca
gacggacaaatcagcccgattgatgcgtttaaaaacgcagttaacaactatttaaaccaa
tttagcgtattttcaaaagaattcaaacttgagcaaaaaacgtcacaaagcgttgagctt
gacgaagtttacaatgtactttttgaaccaattgagaatttgaatttaagaagcagaagt
ttcaatgcgcttgacagagcaggtatcagatttgtcggtgagcttgtacttatgggtaaa
gaaaaaatctcaaatatcaaaaaccttggtactaaatctttagaagagatttttgacaaa
cttgaagaaatcggattcccgttaaataaaacattgccgcttgatattaaaaaagcaatt
gaagataaactatcacaacttaaggagaattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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