KEGG   Nitrospirillum amazonense: Y958_02380
Entry
Y958_02380        CDS       T04935                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
nao  Nitrospirillum amazonense
Pathway
nao00300  Lysine biosynthesis
nao00470  D-Amino acid metabolism
nao01100  Metabolic pathways
nao01110  Biosynthesis of secondary metabolites
nao01120  Microbial metabolism in diverse environments
nao01230  Biosynthesis of amino acids
Module
nao_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:nao00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Y958_02380 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Y958_02380 (lysA)
Enzymes [BR:nao01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     Y958_02380 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ASG19803
UniProt: A0A248JM44
Position
1:complement(485859..487121)
AA seq 420 aa
MAFSYVSGVLTADGVPLDRLAEAVGTPVYVYAASRLRANYQAYTRAFARDPVDVCFALKA
NSNQSIISLFARLGAGADVVSEGEMRRALAAGVPPEKVVFSGVGKTRDELAAALVAGIHQ
INVESLPELEVLSAVATELGRTAPVALRINPDVDAGTHGKIATGRKEDKFGIDLGHAVAA
YAKASSLPGLAPKGYAVHIGSQLLNINPYDDAYGHLSDLVIATREAGLKIERLDLGGGLG
VPYKGEAAPDHDAYAGIVRKRLGNLGCRLTLEPGRSLVGDAGVLLARVIYVKEGLHRRFL
IVDAAMNDLMRPTLYDAYHGIRPVLEPAAGAPLSPMDVVGPICETGDTFARQRELPPVAQ
GELVAFMTAGAYGAAMSSTYNSRPLVAEVLVDEGQWAVIRRRQTFEEMLALDVTPQWRHV
NT seq 1263 nt   +upstreamnt  +downstreamnt
atggccttctcctatgtttccggcgtgctgaccgccgacggcgttcccctggaccggttg
gccgaggccgtcggcacccccgtctatgtctatgccgccagccgcctgcgggccaattac
caggcttacacccgggccttcgcccgtgatccggtggatgtctgcttcgccctcaaggcc
aattccaaccaatccatcatcagcctgttcgcccgcctcggcgctggcgccgacgtggtg
tcggaaggggagatgcgccgcgcgctggccgccggcgtgccgccggaaaaggtggtgttc
tccggcgtgggcaaaacgcgggacgagctggcggcggcgttggtggccggcatccaccag
atcaacgtggaaagcctgccggagctggaggttctgtcggccgtggcgacggagctgggc
cgcaccgcccccgtggcgctgcgcatcaatccggatgtggacgccggcacccatggcaag
atcgccacgggccgcaaggaggacaagttcggcatcgacctgggccacgccgtggcggcc
tatgccaaggccagcagcctgcccggcctagcgcccaagggctatgccgtccacatcggg
tcgcagctgctgaacatcaacccctatgacgacgcctacggccacctgtcggacctggtg
atcgccacccgcgaggccggcctgaagatcgagcggctggacctgggcggcggcctgggc
gtgccctacaagggcgaggcggcgccggatcatgacgcctatgccggcatcgtgcgcaag
cgcttaggcaatctgggatgccgcctgacgctggagccgggccggtcgctggtgggcgac
gccggcgtgctgctggcccgggtcatctacgtcaaggaagggctgcaccgccgcttcctg
atcgtggacgcggccatgaacgacctgatgcgccccacgctgtacgacgcctatcatggc
atccgcccggtgttggaaccagccgccggcgccccgctttcacccatggacgtggtgggc
cccatctgcgagacgggcgacaccttcgcccgccagcgggagctgccgccggtggcccag
ggcgaactggtggccttcatgaccgccggggcctacggcgccgccatgtcgtccacctac
aactcccgccccctggtggcggaggtgctggtggatgaggggcagtgggcggtcatccgc
cgccgccagacgttcgaggaaatgctggccctggacgtgacgccgcaatggcgccacgtt
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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