KEGG   Novosphingobium aromaticivorans: Saro_0311
Entry
Saro_0311         CDS       T00322                                 
Name
(GenBank) Conjugal transfer protein
  KO
K20531  type IV secretion system protein TrbF
Organism
nar  Novosphingobium aromaticivorans
Pathway
nar02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:nar00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Saro_0311
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nar02044]
    Saro_0311
Secretion system [BR:nar02044]
 Type IV secretion system
  Trb secretion system protein
   Saro_0311
SSDB
Motif
Pfam: VirB8
Other DBs
NCBI-ProteinID: ABD24759
UniProt: Q2GBL4
Position
complement(336357..337040)
AA seq 227 aa
MFRRPTIRYGRTPEPETPYQRAAQVWDDRIGSARVQARSWRLAFFGALGLSTCLTAGIIW
QGARGSIVPWVVEVDKLGEAQALAPADAGFAPSDPQIAFHLARFIEQVRSIPDDPIVVRQ
NWLRAYDFATDKGALALNDYARTNDPFALIGREQVGVDVTSVIRASPTSFRVAWVERRYR
DGSLAETSRWTAILTTVVQPPRTPDALRKNPLGIFVNAINWSKELGS
NT seq 684 nt   +upstreamnt  +downstreamnt
atgttccgacgccccaccattcgttatggcaggactcccgaacccgaaacgccctaccag
cgcgccgcccaggtctgggatgaccggatcggctcggcccgcgttcaggcccgcagctgg
cgactcgccttcttcggcgcgcttggcctgtcgacctgcctgaccgccgggatcatctgg
cagggcgcacgcggcagcattgtcccctgggtagtcgaggtcgacaaattgggcgaagcc
caggccctggcccctgcggatgccggttttgcaccgtccgatccccagatcgccttccac
ctcgcgcgcttcatcgagcaggttcgcagcatccccgacgatccgatcgtcgtgcgccag
aactggctcagggcctatgatttcgcgaccgacaagggcgcgctcgccctcaacgactat
gcccggaccaacgacccctttgcgctcatcgggcgcgaacaggtcggcgtcgatgtcacc
agcgtgatccgggcatcgccgaccagcttccgcgtcgcctgggtcgagcgccgctaccgc
gacggcagtctcgccgagacaagccgctggaccgcgatcctgaccaccgtcgtccagcct
ccgcgcacgcctgatgccctgcgcaagaacccgctcggcattttcgtcaatgccatcaac
tggtcgaaggaactcggatcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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