KEGG   Novosphingobium aromaticivorans: Saro_0312
Entry
Saro_0312         CDS       T00322                                 
Name
(GenBank) TrbL/VirB6 plasmid conjugal transfer protein
  KO
K07344  type IV secretion system protein TrbL
Organism
nar  Novosphingobium aromaticivorans
Pathway
nar02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:nar00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Saro_0312
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nar02044]
    Saro_0312
Secretion system [BR:nar02044]
 Type IV secretion system
  Trb secretion system protein
   Saro_0312
SSDB
Motif
Pfam: TrbL
Other DBs
NCBI-ProteinID: ABD24760
UniProt: Q2GBL3
Position
complement(337044..338354)
AA seq 436 aa
MGGTGVVDRFLDIFSRYIDSGFGLLSGEVAFIATTLIVIDVTLAALFWTWGEQDDVIARL
VKKTLFVGIFAYIIGNWNNLARIVFESFAGLGLKASGTGFSAGELLQPGRVAQVGLDAAR
PLIEAISDLMGFVSFFENFLQIVILLVAWALVVIAFFILSIQLFVTLIEFKLTTLAGFVL
IPFGLFGKTAFMAERVLGNVVSSGIKVLVLAVIVGIGSTIFSEFTSAIPAEPTIEDALSI
VLASLTLLGLGIFGPGIANGIVAGGPQLGAGAAAGTALMAGGAAAGAVAGAKLAGGAVAS
AASSVAHGTSRAAGGATTAYAMGSAGKSGAAAIGSGAAAVGDAALGATVSPLRKAGEGLQ
QSFREGGRSAITNTGGTITPGPDTPAPPTAEAGQPAWARTMKNRQTLAQGATIAAHTLKA
GDSSGAGASIDTSEKD
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgggtggcaccggcgtcgtcgaccgcttcctcgacatcttctcacgctacatcgattcc
gggttcggcctgctgtcgggcgaggtcgctttcatcgcgaccacgctgatcgtcatcgat
gtgacgcttgccgccctgttttggacctggggcgaacaggacgacgtcatcgcccgcctg
gtcaagaagaccctgtttgtggggatcttcgcctacatcatcggcaactggaacaacctc
gcccggattgtcttcgagagctttgccgggctcggcctcaaggccagcggcaccggcttt
tcggcaggcgagttgctccagcccggccgtgtcgcccaggtcgggctcgatgccgcacgg
cccctgatcgaggcgatctcggacctcatgggcttcgtcagcttcttcgagaacttcctg
cagatcgtcatcttgctcgtcgcctgggcgctggtcgtgatcgccttcttcattctctcg
atccagctgttcgtcaccctgatcgagttcaagctgaccacgctcgcgggcttcgtcctc
attcccttcggcctgttcggcaagaccgccttcatggccgagcgcgtgctcggcaacgtg
gtctcgagcgggatcaaggtgctcgtgctggcggtcatcgtcggcatcggctcgaccatc
ttttcggaattcaccagcgccattccggccgagccaaccatcgaggatgcactctcgatc
gtgctggcgagcctgaccctgctcgggctcggcattttcggacccggcattgccaacggc
attgtcgccggaggcccgcagctgggggctggtgccgccgcaggaaccgcactcatggcg
ggtggggccgctgctggcgcggttgccggagcaaagcttgccggcggcgcagtagccagc
gccgcctccagcgttgcccacggcacctctcgtgccgccggcggcgccacgactgcctat
gctatgggttctgccgggaagagcggcgctgccgctatcggttctggcgcggcggctgtc
ggagacgcggcgctgggcgccaccgtctcgccgctgcgcaaggccggcgaaggcctccag
caatcgttccgtgagggcgggcggtccgcgatcaccaacaccggcggcaccatcacgccg
ggtcccgacaccccggctccgcccactgccgaggccggtcagccggcctgggcccggacg
atgaagaaccggcagaccctcgcgcaaggcgccaccatcgccgcccacacgctcaaggct
ggcgacagcagcggtgcgggcgcttccatcgacacatcggaaaaggactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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