KEGG   Novosphingobium aromaticivorans: Saro_0314
Entry
Saro_0314         CDS       T00322                                 
Name
(GenBank) putative conjugal transfer protein TrbJ
  KO
K20266  type IV secretion system protein TrbJ
Organism
nar  Novosphingobium aromaticivorans
Pathway
nar02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:nar00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Saro_0314
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nar02044]
    Saro_0314
Secretion system [BR:nar02044]
 Type IV secretion system
  Trb secretion system protein
   Saro_0314
SSDB
Motif
Pfam: DUF948 DUF4141 DUF7653 sCache_2
Other DBs
NCBI-ProteinID: ABD24762
UniProt: Q2GBL1
Position
complement(338682..339458)
AA seq 258 aa
MKSPLKPPGLRPILAAGAAVLSLGAAVIAPAPAHAQFGFGGIVYDPTNYAQNVLTAARTL
EQINNQIRSLQNQATSLINEARNLQSLPLTVLEPIQQQIRQTQQLLSKAQGIAYDVQAIE
REFARNYSPASLTGSQRDMVRGAEDRWRTSVGAFEDALKVQAGAVQNIEGSRTAVQSLVT
ASQSATGALQAAQAGNQLLALQSQQLADLIATMAAMNRAQALDAANEAAAKAQAREQLRR
FMAPGRGYVPVSTKLYRD
NT seq 777 nt   +upstreamnt  +downstreamnt
atgaaatcgccgctcaaacccccgggcctccggccgatcctcgcggcaggcgcagctgtg
ctgtcgctgggtgcagccgtgatcgcgcccgccccggcccatgcccagttcgggttcggc
gggatcgtctacgatcccaccaactacgcccagaacgtgctgacggcggcccgcacgctc
gagcagatcaacaatcagatccgttcattgcaaaaccaggcgacgtcgctgatcaacgag
gcgcgcaatctgcaaagtctgccgctaaccgtgctcgagccgatccagcagcagatccgg
cagacccagcaactgctgagcaaggcccagggaattgcctatgacgtgcaggcgatcgag
cgcgagttcgcccgcaactattcgccggccagcctgaccggttcgcagcgcgacatggtt
cgcggcgcggaggaccgctggcgcaccagcgtcggggccttcgaagatgcgctcaaggtc
caggccggagccgtccagaacatcgaaggctcccgcaccgccgtgcagagcctggtcacc
gccagccagtcggccaccggcgcgcttcaggcggcgcaagccggaaaccagctgctcgcg
ctgcaatcgcagcagctggccgatctcatcgcgaccatggcggccatgaaccgggcccag
gcgctcgatgctgccaatgaagctgccgccaaggcccaggcccgcgagcagctgcgccgc
ttcatggcgccgggccgcggctacgtgccggtgagcacgaagctctatcgggactga

  All links  
Gene (4)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (9)   

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