KEGG   Nicotiana attenuata (coyote tobacco): 109207814
Entry
109207814         CDS       T05870                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 12
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03020  RNA polymerase
nau03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109207814
  09124 Replication and repair
   03420 Nucleotide excision repair
    109207814
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nau03021]
    109207814
   03400 DNA repair and recombination proteins [BR:nau03400]
    109207814
Transcription machinery [BR:nau03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     109207814
  RNA polymerase III system
   RNA polymerase III
     109207814
  RNA polymerase I system
   RNA polymerase I
     109207814
DNA repair and recombination proteins [BR:nau03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109207814
SSDB
Motif
Pfam: DNA_RNApol_7kD YjdM_Zn_Ribbon DUF5816 zinc_ribbon_13 OrfB_Zn_ribbon DZR HypA zf-ribbon_3 Prok-RING_1 DUF1451
Other DBs
NCBI-GeneID: 109207814
NCBI-ProteinID: XP_019226352
Position
Unknown
AA seq 52 aa
MDSQPVEPVSYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
NT seq 159 nt   +upstreamnt  +downstreamnt
atggattctcaacctgttgaacccgtcagctacatctgtggagattgtggacaggagaat
accctaaagcccggtgatgtgatacagtgccgtgaatgtggttatcgtattctctacaag
aaacgaacccgcagaattgtgcagtatgaagctcggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (10)   
   Pfam (10)   
All databases (23)   

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