KEGG   Nicotiana attenuata (coyote tobacco): 109217619
Entry
109217619         CDS       T05870                                 
Name
(RefSeq) small RNA degrading nuclease 5
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    109217619
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nau03009]
    109217619
Ribosome biogenesis [BR:nau03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    109217619
SSDB
Motif
Pfam: RNase_T THP2 KIP1
Other DBs
NCBI-GeneID: 109217619
NCBI-ProteinID: XP_019237430
UniProt: A0A1J6JZ97
Position
Unknown
AA seq 573 aa
MSCQNSKTEETPDEQHNTSKDPKHKPFFDVYGPQGRADIVFNQPESNSTLNLQDVQGLVT
WVLADGFMPSWAFIKNKPLIPKVVMLYVPGLDAALYLSQSKVLKGFKECCGIPRPVLALS
CVSDGNQTIDALLTYKSKRKRKEAEHISPINTEPSEQGAETPTTEPLSFVDLKKDIPFPI
SYYTLTDKELEENGYCCDQPEFLSTLPAPSGTSPHEILALDCEMCITREGFELTRVTLVD
VKGQVLLDKLVKPSNDIVDYNTRYSGITCQMLEDVTTTLKDIQEEFLKLVHKETILVGHS
LENDLLALKIIHNLVIDTAVLYKHPRGSYKAALRVLSRKFLGREIQDSGNGHDSIEDAKA
TLELALLKIKNGPDFGIPQCQRLLRQKLLSVLSDSGKKSSIIDHISIVRRYAAELSHTIP
VSSDDEALSKANKEVRNDKVQFIWTQFAELYAYLRKQADDPEKLNKKLAKMIALLTCEKK
STSRRNVKYDVTPELKDILSHMNRRVRSIYSNLPLNAMLIICTGHGDTAIVQRVRKILSE
QTDASMSRENIVKVLEELQAQAEVGLCFVGVKH
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgagttgccagaacagtaaaacagaagaaacgcccgacgaacaacacaataccagcaaa
gaccctaaacacaaacccttctttgacgtttacggccctcaggggagagcagatattgtt
ttcaatcaaccggaatccaattcaactttgaaccttcaagacgtgcaaggtcttgtcaca
tgggtgcttgctgatgggttcatgccgtcatgggcttttatcaaaaacaagcctttgatc
cctaaagtggttatgctgtatgttcctggccttgatgccgctctatatttgtcacagtct
aaagtgctcaaaggtttcaaagaatgctgtggtattccgaggccagttttagctctcagc
tgtgtatcagatggaaatcagacaatagatgcactccttacgtacaaatcaaagaggaaa
aggaaagaagctgagcacatttcaccaataaacaccgagccttctgaacaaggtgctgag
actcccactacggagcctctatcttttgttgacctcaaaaaggatataccatttcccatc
agttattacacacttacggataaggaactagaagaaaatggatattgttgtgaccaacca
gaatttctttcaacgctccctgctccttcaggaacatctccacatgaaattttggccctt
gactgcgagatgtgtattacaagggaaggctttgagcttaccagagtgacactagtggat
gttaaaggacaggttctgctggataaattggtcaaaccatcaaacgacattgttgactac
aatactaggtatagtggaattacttgtcagatgttggaggatgtgactaccactcttaaa
gatatccaggaggagttcttgaaactggttcacaaggagaccattctggttgggcattcc
ttggaaaatgatttattagccctgaagatcattcataatttggtaatagatactgctgtg
ttgtacaaacatccaagaggatcctacaaagctgctcttcgcgttctgagcagaaaattt
ctcggtagggagatacaggactcgggcaatgggcatgacagcattgaagatgcaaaagct
acactggaactagcactactaaaaataaaaaatgggcctgattttggtatacctcaatgt
caacgattactgcggcagaagcttctttcagttctgagtgactctggcaaaaaatcctca
atcattgatcatatatccatagtgaggagatatgctgctgaattgtcccatacaattcca
gtatcatctgatgatgaagcactttcaaaagccaacaaagaggtcagaaatgataaagta
cagtttatctggacgcaatttgcagagttatatgcatatctcaggaagcaagcagatgac
cctgagaagctaaataaaaagttggcgaaaatgatagcattgctgacgtgtgagaaaaag
tctactagcagaagaaatgtcaaatatgatgtcacccctgaactgaaggacattctgagc
cacatgaatcgtagagtcaggagcatttactccaatcttcctctaaatgcaatgcttatt
atttgcactggtcatggagacactgcaatagttcaaagagtgaggaaaatcttgtcggag
cagacggacgcctcaatgtcccgtgagaatattgttaaagtcttggaagagttgcaggca
caagctgaagttggtttgtgctttgtaggtgtcaaacactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system