KEGG   Nicotiana attenuata: 109225253Help
Entry
109225253         CDS       T05870                                 

Definition
(RefSeq) autophagy-related protein 16
  KO
K17890  autophagy-related protein 16-1
Organism
nau  Nicotiana attenuata
Pathway
nau04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:nau00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    109225253
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nau04131]
    109225253
   03029 Mitochondrial biogenesis [BR:nau03029]
    109225253
Membrane trafficking [BR:nau04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    109225253
 Others
  Rab GTPases of specific organelles
   Auto phagosome
    109225253
Mitochondrial biogenesis [BR:nau03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    109225253
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: WD40 ATG16 ANAPC4_WD40 Nup160 eIF2A Cytochrom_D1 Ge1_WD40 DUF5046
Motif
Other DBs
NCBI-GeneID: 109225253
NCBI-ProteinID: XP_019245398
Position
5
AA seq 509 aa AA seqDB search
MSYEEVAVGAIRDALKALRKRHLVEEGAHAPAFLALTRPLVLQGSEWKEKAENLEVELQQ
CYKAQARLSDQLVVEVAESRASKSLVQEKEAIITDLQNELNESRDECSRLTELLAEKTKA
LELIMGEHQDLKAQLEAMTLRANNAEAENKTLVDRWMLQKMQDAERLNEANALYEDMLDK
VKATSIEKLARQQVDGVVRQSEDGADFYAESSLPSICKQRIPAHDGGCASILFEYNSSKL
ISGGQDRAIKMWDTTSGSLSNSLYGCLGSVLDLSITHDNKYIIAASSSNNLYVWDANSGR
IRHTLTGHVDKVCAVDVSKFSSRYVVSAAYDRTIKIWDLQKGYCTNTIIFHSNCNSLSFS
MDGLTICSGHVDGSLRLWDIQTGKLLSEVAAHSQAVTSVSLSRNGNVILTSGRDNLHNLF
DIRTLEICGTFRANENRVASNWSRSCICPDDSYVAAGSVDGSVHIWSVANAKMVSTLKEH
TAPVLCCSWSGLGKPLATSDKSGIICIWS
NT seq 1530 nt NT seq  +upstreamnt  +downstreamnt
atgtcatacgaagaagttgctgttggagcaattagggatgctttaaaggctctaagaaag
cggcatttagtggaggaaggggctcatgcccctgctttccttgccctcactcggcctctc
gttttgcagggttcagagtggaaagagaaagctgaaaatcttgaagtggaacttcagcaa
tgttacaaagctcaagcacgtctgtcggatcagcttgtggtggaagtagctgaatcaaga
gcatcaaaatctttagttcaagagaaggaagctatcattactgaccttcagaacgagcta
aacgaatcaagggatgaatgttctcgtttaactgaacttcttgcggaaaagactaaagct
ttggaattgattatgggtgagcaccaggaccttaaagcacaacttgaagcaatgactctg
agagcaaacaatgctgaggcagaaaataaaacgttagttgatcgttggatgctgcagaag
atgcaggacgctgagcgccttaacgaggctaatgctctctatgaagatatgctggataag
gtcaaggccaccagtatagagaaacttgctcgtcaacaagtggatggtgtggtccgccaa
agtgaagatggtgcagacttctatgcagaatcttcccttcctagtatatgcaagcaaaga
atccccgcccatgatggtggatgtgcctcgattctttttgagtataactccagtaaattg
ataagcggtgggcaggaccgggcaattaaaatgtgggatactacaagtggatcattaagc
aacagtctttacggttgtctgggttctgtcctcgatctttccattacacatgataacaaa
tacatcattgcagcaagtagttcaaataacttgtatgtgtgggatgcaaattcaggcagg
atacgacatactcttactgggcatgtagacaaagtttgtgctgtagacgtgagcaaattt
tcaagtcgatacgtggtgagtgctgcgtatgatcgtaccataaaaatttgggatctgcag
aagggctactgtactaacactattatcttccacagtaactgtaatagcctttcgtttagc
atggatggcctgaccatttgttccggtcacgtcgatgggagtcttagattatgggatatt
cagacagggaagcttctgagtgaagttgctgcacattcacaggctgttacatcagtttca
ctctctcgaaatggaaatgtaatattaaccagtgggagagacaacttgcacaatctattt
gatattcgtacccttgaaatttgtggcactttcagagcgaatgaaaaccgagttgcatct
aattggagtcgttcctgtatctgtccagatgacagttatgttgctgctggttctgttgat
ggatctgttcatatttggtcagtagcaaacgctaaaatggtaagcactttgaaagaacac
acggcccctgttctatgttgttcatggagtggtcttggtaaacctctggctacctcggat
aagagtggaatcatatgtatttggtcatag

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