KEGG   Nicotiana attenuata (coyote tobacco): 109226717
Entry
109226717         CDS       T05870                                 
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109226717
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nau03019]
    109226717
Enzymes [BR:nau01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     109226717
Messenger RNA biogenesis [BR:nau03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     109226717
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 CHASE3 Nrap_D2
Other DBs
NCBI-GeneID: 109226717
NCBI-ProteinID: XP_019247105
UniProt: A0A1J6ISS6
Position
6:23692815..23701552
AA seq 784 aa
MVGSESLTPPRPEAAPPPPKKYGVTKPLSSAGPTDADLQRNASLEKFLKDSGLYESEEET
ERREEVLRQLDQIVKSWVKQLTHQRGYTDQMVEDANAIIFTFGSYRLGVHGPGADIDTLC
VGPSYVNRDEDFFIILHDILAEKEEVSELQPVPDAHVPVMKFKFQGISIDLLYASISLLV
VPEDLDISDRSVLYSVDEPTVRSLNGCRVADQILKLVPNAEHFRTTLRCLKFWAKRRGVY
SNVTGFLGGVNWALLVARICQFYPNAVPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGF
LVWDPRKNPKDRTHHMPIITPAYPCMNSSYNVSPSTLRVMMDQFQSGNKICEEIELNKAQ
WAALFEHYLFFEVYKNYLQVDIVAADNDDLLAWRGWVESRLRQLTLKIERDTNGMLQCHP
YPNEFVDLSKPCPHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFKQDVSMYTYWRPGMDI
YVSHVRRKQIPPFVFPDGYKRPRQSRNTSHSTPEKVARGCMSPEERHPKRKQEDETVGVN
WGKLGKRASISPQRIGSVSPLGGPSRSDGSSQIIISDESQKELESSCLLDSSDDNSLHRC
SRNDASLIDSSICAPDSLNYTMSRNSTLSGLPREVDLDSSNTKSFPSQEMLSPLQDICTR
NVQNFQVLQNDEKGEILGSLHLDNAGQLNEPGVQTGCAERGERVPVSNSNIQNLTCEGDI
SLADRISQLGDGCLSGNGVLGNGLAEKSQPNHSLARAMESQDGASSEAVQEPAIRHVFLW
PCVL
NT seq 2355 nt   +upstreamnt  +downstreamnt
atggtgggttccgagagcttaacgccgccgcgaccagaggcggcgccaccgccgccgaag
aaatatggtgtcacgaagcctttgtctagtgcggggcccaccgatgcagatcttcaaaga
aatgcatcattagaaaagtttttgaaggactcagggttgtatgagagcgaggaagaaaca
gaaaggagagaagaggtgctgcgtcagcttgatcagattgtaaaatcatgggtgaaacaa
ttgactcaccagagaggctacactgatcaaatggtggaggatgcaaatgctatcatattc
actttcggttcttatcggctaggagttcatgggcctggagctgacatagacacattgtgt
gttggtccctcttatgtcaaccgtgatgaagatttctttatcattctgcatgatattttg
gctgaaaaggaagaagttagtgaacttcaaccagttcctgatgctcatgtcccagttatg
aaattcaaatttcaaggaatatctattgatctcctttatgcaagtatatctctcttagtt
gtccctgaagatttagatatctcagatcgatctgtactctacagtgtggatgagccaact
gttcgaagtctcaatgggtgccgggttgctgatcaaatattgaaactagtgcctaatgct
gagcacttccgcacgactcttagatgtctcaagttttgggcaaaaaggcgtggtgtttat
tccaatgttaccggatttcttggtggtgtcaattgggctcttctggttgctcgcatttgc
cagttttatcctaatgccgtccccagtatgcttgtttctaggttcttcagagtttataca
caatggcgttggccaaatccagtgatgctatgcccaattgaagaggatgaacttggtttt
cttgtttgggaccctcgcaagaatccaaaagaccgaactcatcatatgccaattataact
cctgcttatccttgcatgaactccagctataatgtctcgccaagtactcttcgagtaatg
atggaccaatttcagtctggtaacaagatttgtgaggagatagagttgaataaagcacag
tgggccgcgctttttgagcattatcttttctttgaggtgtacaaaaactatctgcaggtt
gacattgtagcggcagataatgatgatttgctagcttggagaggctgggtggaatcccgg
cttagacaactaacactaaagatcgagcgtgacacaaatgggatgttgcagtgccatccg
tatcctaatgaatttgtagacttgtctaagccatgtccacattgtgctttttttatgggc
ttgcagaggaaacagggtgtaaaagtgcaagaaggacagcagtttgatattcgtggcaca
gttgatgagtttaagcaagacgtaagcatgtacacttattggagaccaggcatggatatc
tatgtatctcatgttcggaggaagcaaattcctccatttgtctttccagatgggtataag
agaccacgtcaatctaggaatacaagtcatagtactcctgagaaagttgctagaggctgc
atgtctcctgaagaaaggcatccgaagaggaagcaggaagatgaaacagttggtgtaaat
tggggaaaactagggaaacgtgcttctatcagcccgcaaaggatagggtctgtttctcct
ttaggtggtcctagtaggtctgatggatcatcacagataatcatttctgacgagtcacag
aaggagcttgagagttcttgcctactggacagttctgatgataattcattacataggtgc
agcagaaacgatgcctctctgattgacagttccatttgtgcacctgatagtttaaattat
acgatgtcaaggaattccactttatccggacttcccagagaagttgatttagatagttct
aacacaaaatccttcccaagccaagagatgcttagtccgctccaagacatttgcactaga
aatgtccaaaattttcaggtgttgcagaatgatgagaagggggagattttgggatcactt
catctggataatgctgggcagctcaatgaaccaggtgttcagactggttgcgcagaaaga
ggtgaaagagtgcctgtatcaaattccaacattcaaaacctcacttgcgagggtgatata
agcttggctgaccggatttcacaactaggggatggatgtttaagtgggaatggagtcttg
ggtaatggcttggccgagaagtcacagccaaaccattctctcgcaagggcaatggaatcg
caggatggggctagctcagaggctgtgcaggagcctgcaataaggcatgtgtttctgtgg
ccctgtgttttatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (24)   

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