KEGG   Nicotiana attenuata (coyote tobacco): 109230212
Entry
109230212         CDS       T05870                                 
Name
(RefSeq) chaperonin 60 subunit beta 2, chloroplastic
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109230212
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nau03019]
    109230212
   03110 Chaperones and folding catalysts [BR:nau03110]
    109230212
   03029 Mitochondrial biogenesis [BR:nau03029]
    109230212
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nau04147]
    109230212
Enzymes [BR:nau01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     109230212
Messenger RNA biogenesis [BR:nau03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     109230212
Chaperones and folding catalysts [BR:nau03110]
 Heat shock proteins
  HSP60 / Chaperonin
   109230212
Mitochondrial biogenesis [BR:nau03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    109230212
Exosome [BR:nau04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109230212
  Exosomal proteins of other body fluids (saliva and urine)
   109230212
  Exosomal proteins of breast cancer cells
   109230212
  Exosomal proteins of colorectal cancer cells
   109230212
  Exosomal proteins of bladder cancer cells
   109230212
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 109230212
NCBI-ProteinID: XP_019251284
UniProt: A0A1J6IW81
Position
1:89695718..89700936
AA seq 599 aa
MASTFAGMSSAGPLAAPSTSSNKLSSVANISSSSFGSRRNVVLRKARSTKISAAAKELYF
NKDGSAIKRLQVGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAREVELEDAV
ENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTTKA
LVAELKNMSKEVEDSELADVAAVSAGNNSEVGSMIAEAMSKVGRKGVVTLEEGKSAENSL
RVVEGMQFDRGYISPYFVTDSEKMSVEYENCKLLLVDKKITNARDLVGVLEDAIRNGYPI
LIIAEDIEQEALATLVVNKLRGALKVAALKAPGFGERKSQYLDDIATLTGGTVIREELGL
TLDKADKEVLGHASKVVLTKDATTIVGDGSTQDAVNKRVAQIKNLIEAADQDYEKEKLNE
RIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVD
AIKETLENDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKFGYNAATGS
YEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAVAGNPMDNSGYGY
NT seq 1800 nt   +upstreamnt  +downstreamnt
atggcatctacttttgctggtatgtcctcagcgggtcccttggctgctcccagcacttct
tcaaacaagctttcctctgttgctaatatatcttcaagctctttcgggagcagaagaaat
gttgttctgagaaaggcacgcagtacaaaaatttccgctgcagcaaaggagctgtatttc
aacaaggatggatcagctatcaagaggctgcaggttggtgtgaacaaacttgctgatcta
gttggagttactcttggcccaaaaggcaggaatgttgttcttgagagcaagtatggtgct
ccaaagattgtcaatgatggagtcactgttgccagagaggttgagttagaggatgcagta
gaaaacattggtgctaaacttgtgaggcaagctgctgccaaaaccaatgatttggctggt
gatgggactactacatctgttgtactagcccagggcctgattgctgaaggtgttaaggtg
gttgcagctggtgcaaaccctgtcctgatcaccagaggaattgagaagactacaaaagcc
ttagtagctgaattgaagaatatgtcaaaagaggtagaagacagtgaactagcagatgtt
gctgcagtaagtgctgggaacaactctgaagtagggagtatgatcgctgaagccatgagc
aaggttggtaggaaaggtgttgtgacccttgaagagggaaaaagtgctgaaaacagtctc
cgtgtggttgaaggaatgcaatttgaccgtggttacatctcaccatactttgttactgac
agtgagaaaatgtccgttgaatatgagaactgtaagttactactggttgacaagaaaata
acaaatgcaagagatcttgttggtgtcctagaagatgctatcagaaatggttacccaatt
ttaattattgccgaagatattgagcaagaagctctagcaacccttgttgtcaataagctt
agaggtgctttaaaggttgctgcccttaaagctcctggttttggtgaacgaaaaagccag
tatcttgatgacatagcaacccttactggaggcactgtgattagggaggaacttggcctt
accttagacaaggctgacaaggaagttctaggccatgcttctaaggtagtgctgactaag
gatgccaccacaattgttggtgatggtagcactcaggacgcagtcaataagcgtgttgcg
cagattaaaaaccttatagaggcagcagatcaagattatgaaaaagaaaagctaaatgaa
agaattgctaaattatcaggaggtgtggctgttatacaggttggagcacaaactgaaaca
gaattgaaggagaagaaactaagggtggaagatgctctcaacgcaacaaaggcagctgtt
gaggaaggtattgttgttggtggagggtgcacgctcctgagacttgcttctaaagttgat
gccatcaaggagactcttgagaatgatgaggagaaggttggagctgatattgttaaaaga
gcattgagctacccattgaagttgattgctaaaaacgctggtgttaatggaagtgttgtc
agtgagaaggtgctttctagtgacaatccaaaatttggatacaatgctgcaactggcagt
tatgaagacttaatggctgctggtattattgacccaacaaaggtggtgagatgttgtcta
gagcatgcgtcatcagtggcgaagacattcttgatgtcagattgtgtggtggtagagatc
aaggagcctgaaccagcagttgctggcaacccaatggacaactcaggatatggttactag

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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