KEGG   Nicotiana attenuata (coyote tobacco): 109239421
Entry
109239421         CDS       T05870                                 
Name
(RefSeq) histone deacetylase 19
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03082  ATP-dependent chromatin remodeling
nau03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    109239421
   03083 Polycomb repressive complex
    109239421
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nau03036]
    109239421
Enzymes [BR:nau01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     109239421
Chromosome and associated proteins [BR:nau03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     109239421
   HDAC complexes
    Sin3A-HDAC complex
     109239421
    BRAF-HDAC complex
     109239421
    REST complex
     109239421
    SHIP complex
     109239421
    MiDAC complex
     109239421
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     109239421
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    109239421
  Chromatin remodeling factors
   NuRD complex
    109239421
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 109239421
NCBI-ProteinID: XP_019261532
UniProt: A0A314L9H0
Position
Unknown
AA seq 498 aa
MDTGGNSLPSGADGKKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMN
VLKPNPARDKDLCRFHADDYVAFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGHCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGFGKGKYYSLNVPLDDGI
DDESYQSLFKPIMGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGIELEDKMPPHEYYEYFGPDYTLHVAPSNMEN
KNSRQILEDIRSKLLDNLSTLQHAPSVQFQERPPDTELPEADEDQEDADSRWDPDSDTND
EDRKPIPSRVRRENVEPEGKGAEDMKTEERLREVESTFAESTSLKGGNSGSVMIDGGQIK
MEQGSSNKPFDQPPDTNS
NT seq 1497 nt   +upstreamnt  +downstreamnt
atggatactggaggaaactccttaccatctggtgcagatggtaagaagagaaaagtgagt
tatttctatgatcctgaagttggcaattactattatggacaaggccacccgatgaagccg
catagaatccgtatgacacatgctcttcttgcccactatggtctattacaacatatgaat
gttctgaagccaaatcccgctagagataaggatctttgccggtttcatgctgatgattat
gttgctttcttgagaagcataacccctgagacacaacaagatcagctgaggcagctgaag
aggttcaatgtcggggaagactgtccagtttttgatggtctttattccttctgtcaaacc
tatgctggaggttctgttggtggggcagttaagttaaaccatggacactgtgatattgcc
gtaaattgggctggtggattacatcatgccaagaaatgtgaagcttctggtttctgctat
gtgaacgacattgtgcttgccattttggagctactcaaagtccatgagagagttttgtat
gtggatattgatatccatcacggtgatggtgtggaggaggctttttataccacagatagg
gtcatgacagtttcctttcataaatttggagattactttcccggtacaggggatgtacgt
gatattggatttggaaagggaaaatactactctcttaatgttccactagatgatggaatt
gatgatgagagctatcagtccctctttaagccgataatgggcaaagtgatggaagttttc
aagcctggtgctgtggtcttacaatgcggtgcagattccttatctggggataggctaggc
tgctttaatctctctattaaaggacatgcagaatgtgtcaaatacatgaggtctttcaat
gtgcctctgctgttgcttggtggaggaggctacacaatacgtaatgttgctcgttgctgg
tgttacgaaacaggagttgcattaggtatagagcttgaagataagatgccgccacatgaa
tattatgaatattttggtccagactataccctgcatgttgctccaagtaacatggagaac
aaaaattctcgtcagattttagaagatataagatcaaagctgcttgataatctttcaaca
cttcagcatgccccaagtgtacagttccaggagcgaccaccagataccgaattacctgag
gctgatgaagatcaggaggatgcagattcaagatgggatcctgattctgacacaaatgac
gaagaccgtaagcccattcctagcagagtgaggagggaaaatgttgaacctgaaggaaaa
ggcgcggaagatatgaaaacagaggagcgcctaagagaagtagagtcgacatttgctgaa
tcaacaagcttgaagggtggcaattcaggttctgtaatgatagatggaggacagattaaa
atggaacaaggaagctctaacaagccttttgatcaaccacctgatactaattcttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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