KEGG   Aquisalimonas sp. 2447: HC341_09785
Entry
HC341_09785       CDS       T06517                                 
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
nax  Aquisalimonas sp. 2447
Brite
KEGG Orthology (KO) [BR:nax00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nax03009]
    HC341_09785 (rlmD)
Enzymes [BR:nax01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     HC341_09785 (rlmD)
Ribosome biogenesis [BR:nax03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    HC341_09785 (rlmD)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 Methyltransf_25 TRAM MTS PCMT Methyltr_RsmB-F Cons_hypoth95 RrnaAD Methyltransf_11 Met_10 Methyltransf_23 Methyltransf_32 PrmA
Other DBs
NCBI-ProteinID: QIT55476
UniProt: A0A6H0IY39
Position
2078355..2079686
AA seq 443 aa
MSKRRRRSRVPMEPLDVAVDGMSHEGRGIAHVDGKATFVHGALPGEQVRMRYTRCHRRFD
EGRVEAVLEPAPERIEPRCPSFGVCGGCSLQHMPPEAQIQFKQSVLLEQFQQFGGVAPAQ
VLEPLTGPIWGYRRKARLAVKDVPAKGRVLVGFREKHSPYVADMTECHVLDPRVAERLSD
LSALVAGLSCRDRLPQIEVAIGDDTVALVFRNLRPFTEGDYAVLADFARAHDFAVYEQPG
NENTVAPIWPREPRLAYRPAPGEPEIVFQPTDFTQVNHDINTAMVGRALEYLDPQPDDRI
LDLFCGLGNFSLPLARRAGTVVGVEGAEGLVQRARDNAAANGLDNAAFHAADLALDQEQP
AWLAGGFDKILLDPPRSGAAEVIPQIADLGAGTIVYISCNPATLARDAGTLVHHYGYRLE
AAGVMDMFPHTAHVESMAVFRKA
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgtctaaacgtcgccgtcgctcccgcgttcccatggagccgctggacgtggccgtcgat
ggcatgagccacgagggccgcggcatcgctcatgtggatggcaaagccaccttcgttcac
ggtgccctgcccggggaacaggtgcgcatgcgctacacccgctgccaccggcgcttcgac
gaggggcgtgtggaggccgtactggagcccgccccggaacgcatcgaaccccgctgcccg
agcttcggtgtctgcggcggttgcagcctccaacacatgccgccggaggcgcagatccag
ttcaagcagagtgtcctgctggaacagttccaacagttcggtggcgtggcgccggcacag
gtgctggagccgctgaccgggcccatctggggctaccgccgcaaggcgcgtctggcggtg
aaggatgtccccgccaaggggcgggtcctggtgggcttccgcgaaaagcacagcccctat
gtggccgacatgaccgaatgccacgtcctcgatcctcgggtggccgagcgtctctcggac
ctgagcgcgctggtggcagggctctcctgccgcgaccgcctgccgcagatcgaagtggcc
atcggcgacgacaccgtggcgctggtgttccgtaacctgcgcccgttcaccgagggcgat
tacgcggttctggcggatttcgcccgggcccacgactttgccgtctacgagcagcccggc
aatgagaacacggttgctccgatctggccccgtgaaccccgcctggcctaccggccagcg
cccggggagccggagatcgtgttccagcccacggacttcacccaggtcaaccacgacatc
aacaccgccatggtggggcgggccctggagtacctggacccgcaacccgacgaccggatc
ctggatctcttctgcggcctcggcaatttctccctgcccctggcccggcgcgcgggcacc
gtggttggggtcgagggcgctgaagggctggtgcagcgtgcccgggacaacgccgcggcc
aacgggctggacaacgccgctttccacgccgccgacctcgccctggaccaggaacagccg
gcctggttggccggggggttcgacaagattctgctggatccaccccgctccggcgcggct
gaggtgatcccgcagattgccgaccttggggccgggaccatcgtctatatctcctgcaat
cccgccacactggcccgggatgccggcacgctggtccatcactacggctaccgcctggag
gcggcgggggtgatggacatgttcccccacaccgcccacgtggagagcatggcggtgttc
cggaaagcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (22)   

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