KEGG   Nocardia brasiliensis: O3I_028220
Entry
O3I_028220        CDS       T02270                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
nbr  Nocardia brasiliensis
Pathway
nbr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:nbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    O3I_028220 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nbr03021]
    O3I_028220 (rpoZ)
   03400 DNA repair and recombination proteins [BR:nbr03400]
    O3I_028220 (rpoZ)
Enzymes [BR:nbr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     O3I_028220 (rpoZ)
Transcription machinery [BR:nbr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     O3I_028220 (rpoZ)
DNA repair and recombination proteins [BR:nbr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      O3I_028220 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AFU03593
UniProt: K0EUW5
Position
complement(6423661..6423942)
AA seq 93 aa
MSSTDLKTVPAYDTPIGLTNPPIDELLERTSSKYALVIYAAKRARQINDYYNQLGDGILE
YVGPLVEPGLQEKPLSVAMREIHSDLLEHSEGE
NT seq 282 nt   +upstreamnt  +downstreamnt
gtgagcagtacggacctcaagaccgttcccgcatacgacaccccgatcggcctgaccaac
cccccgatcgatgagctgctggagcgcacttcgtccaagtacgccctggtcatctacgcg
gccaagcgggcccgccagatcaacgactactacaaccagctcggcgacgggatcctcgaa
tacgtcggcccgctggtcgagcccggcctgcaggagaagccgctctcggttgccatgcgc
gagatccactccgacctgctcgagcactccgaaggcgagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system