KEGG   Nocardioides sp. JS614: Noca_0387
Entry
Noca_0387         CDS       T00443                                 
Name
(GenBank) DNA polymerase III, delta prime subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
nca  Nocardioides sp. JS614
Pathway
nca03030  DNA replication
nca03430  Mismatch repair
nca03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Noca_0387
   03430 Mismatch repair
    Noca_0387
   03440 Homologous recombination
    Noca_0387
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nca03032]
    Noca_0387
   03400 DNA repair and recombination proteins [BR:nca03400]
    Noca_0387
Enzymes [BR:nca01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Noca_0387
DNA replication proteins [BR:nca03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Noca_0387
DNA repair and recombination proteins [BR:nca03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Noca_0387
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA Mg_chelatase DNApol3-delta_C AAA_5
Other DBs
NCBI-ProteinID: ABL79930
UniProt: A1SDP5
Position
417907..419064
AA seq 385 aa
MTVWDGLVGQHRPSEALRAAAHGQGMSHAFLFTGPPGSGRSNAAVAFAAALQCERPEDRG
CGECHECHTVLTGSHADVAVIRTEKLSIGVDEMRDLVRRSALAPVGRRWQIMIVEDADRL
TERAWNALLKAIEEPADRTVWMLCAPTVEDVLPTVRSRCRLVTLTTPTTDDVASFLVRAD
GVDAAVASYAARASQGHIGRARALARDEATRNRRREVVALPARLVSLRACMEAATSLAEV
AKQEAELVTGELDAREKADLDAAYGVVERGRRPREYAPALRDLEKDQKTRAKRRYLDVVD
RGLMDLVSVYRDAIAVATGAAGLLVNEEIRGDVELLARVSTPEVNLRRIAAIFEAREQML
EFNVQPMLALESMMVALVAPEVRTG
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgaccgtctgggacggcctcgtcgggcagcatcggccgagcgaggcgctgcgcgcggcc
gcccacgggcagggcatgagccacgccttcctcttcaccggcccgcccggctcgggtcgg
tccaacgcggccgtcgccttcgcggcggcgctgcagtgcgaacgccccgaggaccgcggg
tgcggcgagtgccacgagtgccacacggtgctgaccggcagccacgccgacgtggcggtg
atccgcaccgagaagctctccatcggggtcgacgagatgcgcgacctggtgcgccgctcg
gccctcgccccggtcggccggcgctggcagatcatgatcgtcgaggacgccgaccggctc
accgagcgggcgtggaacgcgctgctcaaggcgatcgaggagcccgcggaccgcaccgtg
tggatgctgtgcgctcccacggtcgaggacgtgctgcccacggtccggtcgcgctgccgg
ctggtcacgctcacgaccccgacgaccgacgacgtcgcctcgttcctggtccgtgcggac
ggggtcgacgccgcggtggcgtcgtacgccgcccgcgcgagccagggccacatcggccgc
gcccgggcgctggcccgcgacgaggcgacccgcaaccggcgccgcgaggtggtcgcgctg
cccgcccggctggtctcgctgcgcgcctgcatggaggccgccaccagcctcgccgaggtc
gccaagcaggaggccgagctggtgaccggcgagctggacgcgcgcgagaaggccgacctg
gacgcggcgtacggcgtggtcgagcgcggccgccgcccgcgggagtacgcacccgcgctg
cgcgacctcgagaaggaccagaagacccgcgccaagcggcgctacctcgacgtcgtcgac
cggggcctgatggacctggtgtcggtctaccgcgacgcgatcgcggtcgcgaccggcgcc
gccggcctcctggtcaacgaggagatccgcggcgacgtcgagctgctcgcccgggtgtcg
acccccgaggtcaacctgcgccggatcgcggcgatcttcgaggcccgcgagcagatgctg
gagttcaacgtgcagccgatgctggcgctggagtcgatgatggtcgcgctcgtcgcgccg
gaggtgcgcaccgggtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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