KEGG   Nocardioides sp. JS614: Noca_1079
Entry
Noca_1079         CDS       T00443                                 
Name
(GenBank) Exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
nca  Nocardioides sp. JS614
Pathway
nca03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:nca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Noca_1079
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nca03400]
    Noca_1079
Enzymes [BR:nca01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     Noca_1079
DNA repair and recombination proteins [BR:nca03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     Noca_1079
SSDB
Motif
Pfam: Exo_endo_phos Sel_put
Other DBs
NCBI-ProteinID: ABL80596
UniProt: A1SFL1
Position
complement(1137659..1138447)
AA seq 262 aa
MRIATWNVNSLRSRIDRVEAFLDRHEVDVLALQETKAREDQLPLMGIEARGYEVAVAGAN
QWNGVAVISRVGLSDVAVGFPGQPGWAKDVQRAAETESRAIGATCGGVRIWSLYVPNGRK
PDDPHYVYKLDWLARLRDAAQAWRDQDVALVGDWNIAPTDEDVFDMAQFARSTHVTPPER
AAFQAFLEDGYVDVVRPHAPGPEVYTYWDYYRQRYERNRGMRIDFVLGSPSLAARVTGAF
IDREERAGTGASDHAPVVVDLS
NT seq 789 nt   +upstreamnt  +downstreamnt
gtgcgcatcgcgacgtggaacgtcaactccctccgctcccgcatcgaccgcgtcgaggcg
ttcctggaccgccacgaggtggacgtgctcgcgctccaggagaccaaggcgcgcgaggac
cagctgccgctgatggggatcgaggcgcggggctacgaggtcgctgtcgccggcgccaac
cagtggaacggcgtcgcggtgatcagcagggtcgggctgagcgacgtggcggtcggcttc
cccggacagcccggctgggccaaggacgtgcagagagcggcggagaccgagtcccgggcg
atcggcgcgacctgcggcggcgtacggatctggtcgctctacgtgcccaacggccgcaag
cccgacgacccgcactacgtctacaagctcgactggctggcccggctgcgcgacgccgcg
caggcctggcgcgaccaggacgtcgcgctcgtcggggactggaacatcgccccgacggac
gaggacgtcttcgacatggcgcagttcgctcggtccacccacgtcaccccgcccgagcgg
gccgccttccaggccttcctcgaggacgggtacgtcgacgtggtgcgcccgcacgcgccg
ggacccgaggtctacacgtactgggactactaccggcagcgctacgagcgcaaccgcggc
atgcgcatcgacttcgtcctcggttcgccgtccctcgccgcccgggtcaccggggcgttc
atcgaccgcgaggagcgggccgggacgggcgcctccgaccacgccccggtggtcgtcgac
ctgtcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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