KEGG   Notothenia coriiceps (black rockcod): 104949576
Entry
104949576         CDS       T04920                                 
Symbol
vdr
Name
(RefSeq) LOW QUALITY PROTEIN: vitamin D3 receptor
  KO
K08539  vitamin D3 receptor
Organism
ncc  Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ncc01009]
    104949576 (vdr)
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ncc03000]
    104949576 (vdr)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:ncc03310]
    104949576 (vdr)
Protein phosphatases and associated proteins [BR:ncc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104949576 (vdr)
Transcription factors [BR:ncc03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    104949576 (vdr)
Nuclear receptors [BR:ncc03310]
 1. Thyroid hormone like
  1I. Vitamin D3 like receptor
   104949576 (vdr)
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 104949576
NCBI-ProteinID: XP_010774257
UniProt: A0A6I9NCH5
Position
Unknown
AA seq 427 aa
METTVVSTSTLAPDEFDRNVPRICGVCGDKASGFHFNAMTCEGCKGFFRRSMKRKAAFTC
PFNGSCTITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKKDLIQRRKDEEAMREAE
KEARRPRLSDEQSHVIATLVEAHHKTYDDSYSDFCRFRPPVREGPVTRSASRAASLHSLS
DASSDSFSHSPESVDTKMNFNNLLMMYHEQGSSPDSSEEEGSSFSMLPHLADLVSYSIQK
VIGFAKMIPGFRELTAEDQIALLKSSAIEVIMLRSNQSFNLEDMSWSCGGPDFKYQVSDV
TKGQYXLRHVCRLAMHTHALRLIRLGXRKDAHVTRLGLCLLASDRPGVQDHARIEALQDH
LSETLQAYIQLHHPGERLLYARMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLE
VFGSEVS
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggaaaccacagttgtgagtacgtccactctggcccccgatgagttcgataggaacgtg
ccgcggatctgcggcgtgtgtggcgacaaagcctccggattccacttcaacgccatgacc
tgtgagggctgcaaggggtttttcaggcgcagcatgaagcgcaaggccgccttcacgtgt
ccctttaacggcagttgcaccatcaccaaggacaaccggcgccactgccaggcatgccgg
ctcaaacgctgtgtggacattggcatgatgaaagagttcattctgacagacgaggaagtg
cagaggaagaaggacctgattcagcggaggaaggatgaggaagcgatgcgcgaagcggag
aaggaggcgcggcggccccggctgagcgatgaacagagccatgtcatcgccacgctggtg
gaggcgcaccacaaaacatacgacgactcctactctgacttctgccgcttcaggccccct
gtacgtgagggtccggtgacgcgtagtgccagcagagcggcctccctccactctctgtct
gatgcctcctccgactccttcagtcactctccagagtcagtagacaccaaaatgaacttc
aacaacctgttgatgatgtaccacgagcagggcagcagccccgactccagcgaggaggag
ggctccagcttctccatgctgccccacctggctgacctggtctcctacagcatccagaag
gtcatcggctttgccaagatgatccccgggttcagggagctgactgcagaggaccagatc
gccctgctcaagtccagcgctatcgaggtgatcatgctgcgctctaatcagagcttcaac
ctggaagacatgtcctggagctgtggtgggccggactttaaataccaggtcagcgatgtc
accaaaggtcagtattaactacgccacgtgtgccgtttggctatgcatacgcacgctctc
aggctcattcggctcggctgaagaaaggacgcacacgttacacgtctgggtctctgtttg
ttagcttctgaccgcccaggtgttcaggatcacgctcggatcgaggccctccaagaccac
ctgtccgagaccctgcaggcctacatccagctgcaccacccaggagaacggctgctctac
gccaggatgatccagaagctggcggacctgcgcagcctcaacgaggagcactccaagcag
taccgctctctctccttccagccggagcacagcatgcagctcaccccactggtgctggag
gtgttcggcagcgaggtctcctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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