KEGG   Notothenia coriiceps (black rockcod): 104951564
Entry
104951564         CDS       T04920                                 
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04115  p53 signaling pathway
ncc04120  Ubiquitin mediated proteolysis
ncc04137  Mitophagy - animal
ncc04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104951564 (siah1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    104951564 (siah1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    104951564 (siah1)
  09143 Cell growth and death
   04115 p53 signaling pathway
    104951564 (siah1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ncc04121]
    104951564 (siah1)
Enzymes [BR:ncc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104951564 (siah1)
Ubiquitin system [BR:ncc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    104951564 (siah1)
SSDB
Motif
Pfam: Sina_TRAF Sina_ZnF Sina_RING Trm112p
Other DBs
NCBI-GeneID: 104951564
NCBI-ProteinID: XP_010776547
UniProt: A0A6I9NJ11
Position
Unknown
AA seq 352 aa
MKNNKNQYKEIVFILPSQDKSNVEVHHVVLPPPILLFNTLSFLADSISFDVDVSEVNSQG
LRGQNSQMCKMSRQTATALPTGTSKCPPSQRVPTLSGTTASNSDLASLFECPVCFDYVLP
PILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLP
HTDKTEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDI
NLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGH
RRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgaaaaacaacaaaaaccagtataaagaaattgtatttatacttccatctcaagataaa
agcaatgttgaagttcaccatgtggtcctcccgcctcccatccttctctttaacactctc
tcctttttagccgattccatcagttttgatgtagatgtgtcagaggtaaacagccaggga
cttagaggtcagaactcacagatgtgcaaaatgagtcgccagactgccaccgcgctgccc
actggaacctccaagtgccccccctcccagcgcgtccccaccctgtcaggcaccacggcc
tccaacagcgacctggccagcctgttcgagtgccccgtctgcttcgactatgtgctcccc
cccatcctgcagtgccagtccggacacctggtatgctcgaactgccggcccaagctcacc
tgctgccccacctgccgggggcccctgggctccatcaggaacctggccatggagaaggtg
gccaactcggtcctcttcccctgcaagtacgcctcgtcgggctgcgaggtcaccctgccc
cacacggacaagacggagcacgaagagctctgcgagttccggccgtactcctgcccctgc
cccggggcctcctgcaagtggcagggctccctggacgctgtcatgccccacctgatgcac
cagcacaagtccatcaccacgctgcagggggaggacatagtgttcctggccacggacatc
aacctgccgggcgccgtggactgggtgatgatgcagtcctgcttcggcttccacttcatg
ctggtgctggagaagcaggagaagtacgacggccaccagcagttcttcgccatcgtgcag
ctcatcgggacccgcaagcaggcggagaacttcgcctaccggctggagctcaacgggcac
cggcgccgcctcacctgggaggccacgccgcgctccatccacgagggcatcgccacggcc
atcatgaacagcgactgcctggtgttcgacacgtccatcgcacagctgttcgcagagaac
ggcaacctggggatcaacgtcaccatctccatgtgctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (115)   
   KEGG ORTHOLOGY (1)   
   RefGene (111)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (131)   

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