KEGG   Notothenia coriiceps (black rockcod): 104951884
Entry
104951884         CDS       T04920                                 
Name
(RefSeq) ras-related protein Rab-39B
  KO
K07925  Ras-related protein Rab-39B
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    104951884
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncc04131]
    104951884
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:ncc04031]
    104951884
Membrane trafficking [BR:ncc04131]
 Autophagy
  Other autophagy associated proteins
   Rab GTPases
    104951884
GTP-binding proteins [BR:ncc04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab39/42 [OT]
    104951884
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 RsgA_GTPase Gtr1_RagA VGCC_beta4Aa_N GTP_EFTU AAA_22 TniB
Other DBs
NCBI-GeneID: 104951884
NCBI-ProteinID: XP_010776922
UniProt: A0A6I9NK13
Position
Unknown
AA seq 213 aa
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHDWLEEARSHVQPHNIVFLL
VGHKCDLEAQREVTRQEAEKLAGAYGMRYVETSARDAINVEHAFTELTRDIFALVRTGEI
TIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq 642 nt   +upstreamnt  +downstreamnt
atggaggccatctggctgtaccagttccggttgatcgtgatcggggactccacggtgggg
aagtcgtgtctgatccgccgcttcacggagggtcgcttcgcccaggtctcagaccccacg
gtcggcgtggacttcttctcccgcctggtggagatcgagccgggcaagaggatcaagctc
cagatctgggacaccgcggggcaggagcgattcaggtccatcaccagggcgtattaccgt
aactctgtgggcgggctcctcctattcgacatcacaaaccgtcgctctttccagaacgtc
catgattggctggaggaagctcgcagccacgtccagccgcacaacatcgtcttcctattg
gtcggccataagtgtgacctggaggcacagcgcgaggtaactcggcaggaagcagagaag
ttggcaggggcgtacgggatgcgctacgtcgagacgtcggcccgtgacgccatcaacgtg
gagcacgccttcaccgagctgaccagagacatcttcgctctggtgcggaccggagaaatc
acgatccaggagggatgggagggcgtgaagagtgggttcgtccccaatgtcgttcactcc
tcggaggaagtgaccaagagcgaccgccgctgtctgtgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (25)   

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