KEGG   Notothenia coriiceps (black rockcod): 104952305
Entry
104952305         CDS       T04920                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 13A-like
  KO
K19525  vacuolar protein sorting-associated protein 13A/C
Organism
ncc  Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncc04131]
    104952305
Membrane trafficking [BR:ncc04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Rab associated proteins
    104952305
SSDB
Motif
Pfam: VPS13_ext_chorein Chorein_N DUF5764
Other DBs
NCBI-GeneID: 104952305
NCBI-ProteinID: XP_010777403
UniProt: A0A6I9NR05
Position
Unknown
AA seq 540 aa
MVFESLVVDVLNRFLGDYVVNLDCSQLKLAIWGGDAVLRNLEIKENALSQLDIPFKVRAG
HIGRLELKIPWKNLYTQSVEATLDGVYLLIVPTASIKYDAEKEEKQLQEARQRELQRIEE
TKQKAAEQENPDVEKQDTFVEKLVTQVIKNLQVKISNIHVRYEDDVTNPNCPLSFGVSLK
NLSLQTCDEKWNPRLLDENSRLFFKLVQLDNLFAYWNVDSLLFSNHNAEEALQCLQSSID
AQNSLSISHDFIFRPISAAAKLRMNPRSDVDFSSPKVDLMVHLSEVAIELNRPQYISILG
LLGSVDLMSRNLPYRKYRPEVQVHRNACIWWKYMITSVLEVDVKPRLQMWSWQHIRIHRQ
TIKCYRELYKNKITCKKPNEDLLKALKGTEKTLDIFNITLARQQAEVEASKAGLRIFRPG
LKMEEEESQGWLSWMWNMGGEAESETKEVKTGGFDELLTYAEKSKLYTAIGYSDTAANPN
LPKNFEDMKVYFHMERLSVSITDNKDKDEIIRLTVGELKSTLTQRPGAQAIKLHSPAQLV
NT seq 1623 nt   +upstreamnt  +downstreamnt
atggtcttcgaaagcttggtggttgatgtcctcaaccgatttttaggggactacgttgtc
aaccttgactgctcacagctaaagcttgccatatggggaggtgatgctgttcttagaaat
cttgaaataaaggaaaatgccttgagtcaacttgacattccttttaaagtgagagccggt
catataggacggcttgagctaaagatcccatggaagaacctgtacacacagtctgtagag
gcaacactggatggggtctatctactcatagtccccacagcaagcataaagtatgatgca
gaaaaggaggagaagcagctacaggaggctcgtcagagggagctacagcggatagaggag
acaaagcagaaggctgctgagcaagagaatccagatgttgaaaaacaggacacctttgtg
gagaagctggtcactcaggtcatcaaaaacctgcaagttaagatctctaacatccatgtg
cgctatgaagatgatgtcaccaatccaaactgccccttgtcatttggagtgtcacttaaa
aacctcagtcttcagacatgtgatgagaaatggaatcccagacttttggatgagaattcc
cgacttttcttcaagttggttcaactagacaacttgtttgcctactggaatgtcgactct
ttactcttctccaatcacaatgcagaggaagccttgcaatgtctgcagagcagcatcgac
gcacagaactctctttcaatcagccatgacttcatttttcgtcctatctcagcggccgct
aaactgcggatgaatcccaggtcagatgtggacttttcctctcctaaagtggacctgatg
gtccatctcagtgaggtggccattgaactcaacagaccccagtacattagcatcctgggg
ctgctgggctcagtggatttgatgtctcgcaatctcccgtacaggaagtacagacccgag
gtccaggttcacagaaatgcctgcatatggtggaagtacatgatcacaagcgtcctggag
gtggatgtcaaacctcgtctccagatgtggtcctggcagcacattcgcattcaccggcag
acgatcaagtgttacagagagctgtacaagaacaaaatcacctgcaagaaacccaacgag
gacctgctcaaggcactcaaggggactgagaagaccttggatatttttaacatcacgttg
gccagacagcaggcggaggtggaggcaagcaaagcaggtctacgaattttccgtccaggg
cttaagatggaggaggaggagtctcagggctggttgagctggatgtggaatatgggagga
gaggccgaatcagaaacaaaagaggtcaagactggaggttttgatgagctgttaacctac
gctgagaaatccaaactctacactgccatcggatacagtgacaccgctgcaaatcccaac
ctgccaaagaattttgaggacatgaaggtctatttccacatggagaggctgtctgtgtcc
atcactgacaacaaggacaaagatgagatcatcaggctgactgtgggagagctcaagtcc
acactcactcagagacctggagcgcaagccatcaaactccacagcccagctcagcttgtt
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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