KEGG   Notothenia coriiceps (black rockcod): 104955497
Entry
104955497         CDS       T04920                                 
Symbol
dna2
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease DNA2
  KO
K10742  DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc03030  DNA replication
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104955497 (dna2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ncc03032]
    104955497 (dna2)
Enzymes [BR:ncc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     104955497 (dna2)
DNA replication proteins [BR:ncc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    104955497 (dna2)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     104955497 (dna2)
SSDB
Motif
Pfam: Dna2 AAA_12 AAA_11 Dna2_Rift AAA_30 AAA_19 PDDEXK_1 Cas_Cas4 DEAD nSTAND3 bpMoxR UvrD-helicase SRP54 AAA_22 ResIII AAA_25 AAA_18 SLFN-g3_helicase MobB AAA_7 CbiA SMUBP-2_HCS1_1B UvrD_C_2 AAA
Other DBs
NCBI-GeneID: 104955497
NCBI-ProteinID: XP_010781134
UniProt: A0A6I9NT92
Position
Unknown
AA seq 1359 aa
MNRTKLKNTKAPGGQKNILSFFSQNHQKDVLSSAKLPVTGTALARTEPQIKDGQTSTSRP
HSPLKRSIHWDLENIHPLSPDLLLFVPETPDSQIKLSSSSSSDGSRLSPRPGRGLVAGLE
NLGHLSPICRSPRSKSQRARRVMGEEGGHTKREEGCSVKRVISPPQESHNAKRPRNANPA
KPVGPLRTPRCPGDQSEGQSVSNDKGKVLEEQRKHQKERDEKEKDTGFTAITGQKANGNL
HTRPDKDTHTLSCSPAMQRSEEPGEFDLKRAARTSNGDDPTSSDQQQAGGENPGMTSSGP
LEEMVDDSWFDDLMDYKEGLVIEEKSKKPRKVPDHVILSGGLNNRYWVLDVEEKPGKKTL
TITCFKSQHPTETCLLKDGWEMTPVCCGDVVHLEGVSDGGSWVVGREQGFLVLLPDSLIS
GTSISSSIRCMRRAVLADMFKTFDGGSKQMLNGTIVHEVFQRAARAKDFSLETLTKMADQ
ALCSPQYLVDMYSLGVSQEEMKQELHEYLPSLERWAKQYLSSSSPKAISIKIPSNSKAPG
RCQDSAMVVTVAELADIEENVWSPRFGLKGKIDVTARVRIQKPGSGSYRRLEEKTIPLEL
KTGKESNSIEHRSQVILYTLMSLERYNSEAGFLLYLKTGNLHPVVAGHMDRRELLKLRNT
LVHHIHNCVKKEAKRSRLTRLPDILTDRQTCQYCPQQRNCALYERSLDGSSADDCEDLVR
DFLQKETGHLIPPHLSYFSHWLLLCCLEAGTMEAKNGRKRVWLEKPEESEKNGSCVGNVQ
LSGPVTVRSEGVFLHSFQRSSAVPQKGLASSGLASGDRIVVSDQEGRLVGLATGYLCEVS
RTSISCTLDRDLSKFSGVLFRLDADEGVVGLSTHLTNLSRLMVNSEDSDRLRELVVDLRP
PEFISNLSSVLPRESKDTVANILKGLNKPQKQAMKKVLLSKDYTLIVGMPGTGKTTTICT
LVRILHACGFSVLLTSYTHSAVDNILLKLKRFRVGFLRLGQGLKVHPDILPYTEESARKK
GVKSLSELEQLYNKELVVATTCMGIKHPIFTRRRFDFCIIDEASQISQPICLGPLLYAKR
FVLVGDHQQLPPIVQNQEARSLGMDESLFKRLELHDEAVVQLNVQYRMNRQIMSLSNSLM
YEGRLECGSERTASSLLTLPFLLSVQSELSAYAETHPELDLAWIQNTLLPSHPVCFLDCS
MVPALESVEQGGVSNHTEAALIHKLLSLLIKAGCKPSDIGVIAPYRQQLKSISALLLSPA
FAGVEVNTVDRYQGRDKSLIVFSFVRSTSEDGNLGELLKDWRRLNVAITRAKHKLLMVGS
ISTLRRYAPVEKLLNHLQQENMVIQLPPAAHMALQSMSL
NT seq 4080 nt   +upstreamnt  +downstreamnt
atgaacaggaccaaactgaagaataccaaggcgccaggagggcagaagaacatcttatct
ttcttctcccaaaatcaccagaaggacgtgttgtcttctgcaaaattacccgtcactggc
actgcacttgccaggactgaacctcagatcaaagatggccaaacctccacgtcaagaccc
cactcccccttaaagaggagcatccactgggatctggaaaacattcatcccctctcccca
gatctcctcctctttgtccccgagacccccgacagtcagatcaagctctcgtcctcttca
tccagtgatggaagtcgactgagcccccggcccggcagaggtttggtggcgggtctggag
aatctcggccacttgtcacccatctgtcgtagtcccagatctaaaagtcaaagagcacgg
agagtcatgggcgaggagggaggacacacaaagagggaagagggatgctcagtgaaaaga
gtcatcagccctcctcaagagtctcacaatgccaaaagaccaagaaatgccaatccagca
aagccagttggccctttgaggacacctcgttgccccggtgaccaatcagagggccagtct
gtctctaatgataagggaaaggttttagaggaacagagaaaacatcagaaagagagagat
gaaaaggagaaagatactggttttactgcgataacggggcagaaagcaaatggaaaccta
cacactcgtccggataaagatactcacactctttcctgctcacctgcgatgcagagaagt
gaagagccgggagagtttgaccttaaaagggcagcacggacatccaatggagacgacccg
acatcatctgatcagcagcaggctggaggggaaaatccaggaatgacgtcaagcggtcct
ttggaagagatggtggacgacagctggtttgatgacctgatggactataaggaaggtctt
gtcatagaggagaaatccaaaaaaccacgtaaggtgccagaccatgtgattctttctgga
ggacttaacaaccgctactgggtgttagatgtggaggagaagcctggcaaaaaaaccctg
accatcacatgcttcaaatctcaacatccaactgagacgtgtctgctgaaagacggatgg
gagatgaccccagtgtgttgtggggatgtggtgcatctggagggggtctctgacgggggc
tcctgggtggtgggcagggagcagggcttcctggttttactgcctgacagccttatctca
ggcaccagcatctcgagctccatccgctgcatgaggcgagcagtactggcagacatgttc
aagacttttgacggtggctccaaacagatgctgaatggcaccattgtccatgaggtcttc
cagagggcagctagagctaaagacttttcattggagacactgactaaaatggcagaccaa
gccctatgcagtcctcagtacctggtagatatgtacagtttgggtgtgagtcaagaagag
atgaagcaggaactgcatgagtatctgccctcactggagcgttgggcaaagcagtacctc
agctcttcatcgccaaaagccatcagcatcaaaatccctagcaacagcaaagctccaggc
agatgtcaggactcggcgatggttgtcacggtagcagagctggcagatatagaggagaat
gtgtggtcacccaggtttggtctgaaagggaaaatcgacgtgacggcacgggtacgaatc
caaaaaccaggaagtggtagttacagaaggctggaggagaagaccatccccctggagctg
aaaactgggaaagagtcaaactccatagagcatcgcagtcaggtgattctttacactctg
atgagcttggagagatacaattctgaagctggcttcctgctctacctgaagactggcaac
ctgcaccctgtggtggccggccacatggaccgcagagagctgctgaagctgaggaacact
ttggttcatcacattcacaactgtgtgaagaaagaggcgaagcggagccgtttgactcga
cttcctgacatcctgaccgacaggcaaacctgccagtactgtcctcagcagagaaactgt
gctttatatgaaaggtctcttgacggcagctctgcagacgactgtgaggaccttgtgcgt
gacttcctccagaaggagacgggtcacctgatcccacctcatctaagctatttttcccac
tggctgctgctctgctgccttgaggctggcaccatggaggccaagaacggcagaaagcgt
gtgtggcttgagaagcctgaggagagtgagaagaatgggagctgtgtggggaatgtgcag
ctgagcggcccggtgaccgtgcggtctgaaggggttttcctccatagcttccagagaagc
agcgcagtgccacagaagggtttggccagcagcgggttggccagcggagatcgtatcgtt
gttagcgaccaggaaggtcgtctggttggtttagcaacaggatacctgtgtgaggtcagc
aggacatcgatcagctgcactctggacagagacctgtctaagttcagtggtgtgttgttt
cgattggacgctgatgaaggtgtggtgggtctcagcactcacctcaccaatctctccaga
ctgatggtaaacagtgaggacagtgatcgtctgagggagcttgtcgttgaccttcgtcct
ccagagtttatttccaacctcagctctgttctgccaagagagtccaaggacactgtggcc
aacatcctcaaaggtctcaacaaaccccagaagcaggccatgaagaaggtgttgttatct
aaagactacacgctgatcgtcggcatgccaggcacgggcaaaaccacaaccatctgcacc
ctggttcgcatccttcacgcgtgtgggttcagcgtgttgctgaccagctacacccactct
gctgttgacaacatcctgctgaagttaaagcgtttccgtgttggatttctgcgtcttggg
caagggctgaaggttcatccagacatcctgccttacacagaggaaagtgcgagaaagaag
ggagttaaatctctgtctgagttggagcagctttataacaaggagctggtagtggcaacc
acctgtatgggcatcaagcatcccatattcacacgtcggcggtttgatttctgcatcata
gacgaggcttcacagatcagccagccgatctgtctgggaccgctgctctacgccaagaga
ttcgtcctggttggagatcaccaacagctgccaccaatagtgcaaaatcaggaggccagg
tcacttggcatggatgaaagtctatttaaacgacttgagctccatgatgaagcagtggtc
caactcaatgtacagtaccggatgaataggcagatcatgtctctcagtaactccctgatg
tatgagggccgtctggagtgtggatcagagaggacggcctcgtccctgctcactctgccc
ttcctgctgtccgtccaatcagagctcagtgcgtacgctgagactcatccagagctcgac
ctggcttggatacaaaacacgttgctgcccagccaccctgtctgcttcctggattgctcc
atggtgccagcactggagtctgtggagcagggaggcgtcagcaaccacaccgaggcggct
ctcattcacaagctgctgtcactgctcataaaggcgggttgtaagcccagtgatattggt
gtgatcgccccctacagacagcagcttaagagtatctctgctctgctgctgtcccctgcg
ttcgccggtgtggaggtgaatacagtcgacagataccaaggacgagacaaaagtctgatc
gttttttcttttgtcaggagcacttcagaggatggaaatttaggagagctgttgaaggac
tggcgtcgcctgaacgtagccatcaccagggcgaaacacaagctgctgatggtgggctcg
atctcaacgctgcgacgctacgcacctgtggagaaactcctcaaccatctccagcaagag
aacatggttatccagctccctccagcagcccacatggctttacaaagcatgtccctgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (24)   
   Pfam (24)   
All databases (68)   

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