KEGG   Notothenia coriiceps (black rockcod): 104956597
Entry
104956597         CDS       T04920                                 
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8-like
  KO
K04494  chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    104956597
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ncc03036]
    104956597
Chromosome and associated proteins [BR:ncc03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    104956597
SSDB
Motif
Pfam: BRK
Other DBs
NCBI-GeneID: 104956597
NCBI-ProteinID: XP_010782413
UniProt: A0A6I9P646
Position
Unknown
AA seq 1991 aa
MADPIMDLFEDTPLFNLDALPDGSFTQGSSDPVEEALKLALGQVDPPTEADLMDNTGLCV
SVAAPSNLDPAPVQVLTQQPVATAQTISISAAPTVVPAPAVVETVPQIQTQTTIPIVSST
NVATSSTVLLRSPLTSSPVITTTANTQQLTQITHQLTPQQLAAITQQAGGKIVILKGPQG
QAQVLQTVSGATGQTTGKVIRVLSGTQFKPGMNILQGGTVLNQAGQGQAQVKVGTAGVQR
LLQSPNGPVKQMVLTTMPQQTQGQTVQVNSQGQVQLQPAMQAQMQGGEQKRITLVLQQPS
QGMGAGQGQQQITQVQQGGTRLVLGQLPGGKLVLQGSQLAALTQARAAGQAGGQPKVLTI
QLQVQQQPNQQGGIKYQLVSGTGTPGGPQVLQITQGQGGQRVAVPLKMLLQPQTSATTSL
GGTVSVVKVINTSAAGPSNTTTTPSQAIRITKAPGEPTSVRRVEILCKQEKANRIVAEAI
ARAKARGEKNLPRVLNQDELPATQTSPELGGTVTVVSTAKKKSGGGGSKKKSPVAGGATP
KSSGGDKKGKAKTPGGATGAPGGTVIPGSGNKSKSKTKTNTITLVGAKKRKRTGSSDHSD
GELSPASPTTLDDDLITVQTHTKPHGKKGDLFTSGPVCATVTPDRTVTVNERTVELRVVK
GDVVPVLRGHEAGLGERGALALVLDGDGGGSSLQDLVDVLLAEAIAFIVLVHDGGDGTVQ
PELQTGFIQHFPLIGVPSDQTSSRMSKQRTIWEKMSTLWPPALRRGSSLSSSTSLPAERI
RACKWKSEAMGSYTCRNSYISYCWIICRLARLPWYTMAFMSVHVTNSLSQLVMVESGAMI
RKGPVTPASYSSDSSAMDWMVFPRPISSARIQFCLRDKTQGVISDVLGEAIDKHYANLNC
MLGCPSASSSSSCLSCAADPPLMEATAAAVVVTSTSSCSSSSSVILMSRSSVYFFLFTTR
LERLCWPEDKRVNTLVIDTPRVRKQTRQFSSLRGEGGDLSDDSDDEYPPANSRQSRASRR
SDRHSGTGYGRTDCFRVEKHLLVYGWGRWKDILSHARCKRRLSERDVETICRVILVFCLL
HYRGDENIKSFIWELITPPENGREPQTLLNHSGLSIPVPRGRKGKRVKAQSTFDIQKVEW
IRKFNPDTLLLDDSYRKHLKHQCNKVLLRVRMLYYLKQEVIGEHSDAVLKGADIRDVDIW
MPEMEQQEFPAGWWDTEADRSLLVGVFKHGYEMYTTMRADPCLSFLERAGRPDDKAIDAE
QHTGDAELGDDADFDKYSEDPEFKPASRHAKDLFDETDSMNVDDEITVEDKVGPVITESF
SSVSGACDWPSSSSLTARMRRLITAYQRSYRQVQLKIEAEAKGDRRRRRCEQASKLKEIA
RQERQQRWTRREECDFYRVVSTFAVQKFKKEPGLPEAGEPEFDWNRFRTFARLDKKTDES
LSRYFRSFVAMCRRVCHLRTGREDVVEHPQNVAPITEERASRTLYRISLLRRLRERVLPH
PLLAERLSLAPNTSELPAWWNIPEHDHQLMLGSSLHGVSRTELSIFPDPQFSFNQARDEF
VLTQQSAPPPPIMPIMPNILPKVEEDMPVVKEEPAYEDSLLLGGEISAVLQSTPRSHHDG
KERGQGWNIKRSKGRVGKSGERKGEGGSDSDSDSDSGSSSSGRSGSSDESGESDEERARM
KMCDVDGDNSLLSMSTSQDGLLPPDPLRVDWPKDRVLINRLDSLCTLTLSGQWPTGRRYL
PEAQLAPSSELGGDEMAFTRLNRKPGGTPGAPGEEGEDGEFTVKLLKEEGLKLTFSKHAM
MPNGSGGEGSARKKRKDQDLSDPDGLNDPLEKTPRRRDPPTWLKENPDYEVEGDMLELLE
NRSKRKRRRRADKALTGSEKVKVINMRTGKKVGAAFCPMLQDLKEYLQENPDNAVAADWS
ETVRSSVRTKDVITSIRAGDTSRINKLIRKAGSVIGIKLDTFEAVVERRTLNRLLSIMDN
PTHDLHLQLDS
NT seq 5976 nt   +upstreamnt  +downstreamnt
atggcagaccccatcatggacctctttgaggacacccctctgtttaaccttgatgccctg
ccggacggttcattcactcagggctcctcggaccccgtagaggaggctcttaagctggct
ttgggccaagtggacccaccaaccgaggctgatctcatggacaacacgggcctctgtgtt
tctgtagcagctccttccaacctggaccccgcccccgttcaagtcctcacacagcagccg
gtggcgactgctcagactatttccatatctgcagctcccactgtagtccctgctcctgcc
gtggtagaaactgtacctcagatccagacccagaccaccatacccattgtcagcagcacc
aacgtggccaccagtagcacggtcctgctgcgctcacctctgaccagctccccggtcatc
accaccactgccaacacgcagcagctcacgcagataactcaccagctcactccgcagcag
ttagctgccatcacacagcaggccggcggtaaaattgtcattctcaaagggccacagggt
caagcccaggtgctgcagactgtttcaggagccacagggcagaccactggaaaggtcatc
cgtgtgttgtccggcactcaatttaaacctggcatgaacatactgcagggcgggacagtt
ttgaatcaggcgggccagggacaggctcaagtcaaggtgggcactgcgggggtgcagagg
ctgctgcagtctcctaacgggccagtgaaacagatggtgctgaccaccatgccccagcag
acgcagggccagacagtccaagtaaactcccaaggccaggtgcagctgcagccagccatg
caggcccaaatgcagggtggcgaacagaagaggatcaccctggttctccagcagccatcc
cagggaatgggagcgggtcaaggccagcagcagatcacacaggtccagcagggggggact
agactggtgctggggcagctccccgggggcaaactggtgcttcagggaagccagctagcg
gccctgacccaggcccgggctgcaggccaggctggaggccagcccaaagtcctcaccatt
cagctgcaggtgcagcagcagcccaaccagcaaggaggaattaagtaccagctggtctca
ggaacgggaactcccggcggcccacaggtgctgcagatcacgcagggccaaggaggacag
agagttgcagtgccgctcaaaatgcttctgcagccacagacaagcgcgacaacctcgctc
ggcggcaccgtctccgtggtgaaggtcatcaacacgtcggcagcaggcccctccaacacg
accaccacgccgtcccaggccatccgcatcacaaaggctcctggagagccgacctctgtg
cggcgagtggagatcctgtgcaagcaggagaaagcaaaccgcatcgtggctgaagctata
gcccgggcgaaggcgcgcggcgagaagaacctgcccagagtcctgaaccaggacgagctc
ccggccacgcagacctccccagagttggggggcaccgtcaccgtggtgtctactgcaaag
aaaaagagtggcggaggaggtagcaaaaagaaaagtcctgtagctggaggagcaacgccc
aaaagctcaggaggggacaaaaagggcaaagcgaagacgccaggaggagcaacaggagcg
cctggaggcacagtgatacctgggtctgggaacaagagcaaaagcaagactaagacaaac
actattactctagtgggagcaaagaaaaggaagaggactggatcctcagaccactctgat
ggggagttgagtcctgcctcacctactacgctggatgatgacctcattacggtacaaact
catacaaagccacatggcaaaaagggagatctgttcaccagcggtccggtctgtgccaca
gtgactccggaccgcacagttactgttaacgaacgcaccgtagaactcagggtcgtcaag
ggcgatgtcgttccggttctcagaggccacgaagctggccttggagaacgtggagccctt
gccctcgttctcgatggtgatggtggtggctcttcgctgcaggatctggtcgatgtcctc
ctcgcagaagcgattgccttcatcgttctcgtccatgatggcggcgacggcacggtccag
cccgagcttcagactggctttatccaacatttccctctcataggagttcctagtgatcag
acgtcctccagaatgtccaagcagcgcaccatctgggagaagatgagcaccttgtggccg
ccggccttgaggcgaggcagcagcttgtccagtagcaccagcttgccggccgagcgaatc
agagcctgcaaatggaagtcggaggccatggggtcgtacacctgccgcaactcctacatc
tcgtactgctggatcatctgtcggctggccaggctgccgtggtacacgatggcgttcatg
tcggtccatgtgacaaactccctctcccagttggtgatggtggagagtggagcgatgatc
aggaaagggccggtgacgccggcatcgtactcctccgacagtagcgcgatggactggatg
gtcttccccagacccatctcgtctgccaggatacagttctgcctgagagacaagacacag
ggagtcattagtgacgtgttgggagaagcaattgacaagcattatgcaaacctgaactgc
atgctgggctgtccgtcggcgtccagctccagctcctgtttgagctgcgcggctgacccg
ccgctgatggaggccacagctgctgcggtcgtagtaacgtctacatcctcctgctcgtcc
tcatcgtccgttatcttgatgtccaggtcctctgtgtacttcttccttttcaccacgcga
ttggagcgcctctgctggccggaagacaaacgtgtaaacaccctcgtgatcgacactcca
agagtccgcaagcagacccgccagttctccagtttacgaggtgaaggtggagacctgtcc
gatgacagcgacgatgaatatccgcctgccaactccagacagtcgcgggcctcccggcgc
tccgaccgccacagtggaactggctacggacgcacagactgtttccgggtggagaagcac
ctgctcgtctatggttggggtcgctggaaggacatcttgtcccacgccagatgtaagcgg
cgtctgagtgaacgtgacgtggagacgatctgccgcgtcatcctggtgttctgtctgctc
cactatcggggagatgagaacatcaagagtttcatctgggagctcatcacaccaccggag
aacgggcgtgaaccccaaacacttctcaaccactctggcctgtctatccctgttccaaga
ggcaggaagggtaagagggtaaaggcccagagcacatttgatattcagaaggtggagtgg
atccgcaagttcaaccctgacaccctgctactggacgacagctaccgcaagcacctcaag
caccagtgcaacaaggtgctgctgagggtgcggatgctctactacctgaaacaggaggtg
attggagaacattcagacgccgtcctgaaaggggctgacatcagggatgttgacatctgg
atgcctgagatggagcagcaggagttccccgcaggatggtgggacactgaggcagaccgc
tcactgcttgttggcgtattcaaacatggttacgagatgtacaccactatgcgtgctgat
ccctgcctcagcttcctggagagagccggtcggcccgacgacaaggccatcgatgctgag
cagcacactggtgacgccgagctgggagatgatgctgattttgataaatactcagaggac
ccggagttcaagcctgcgtcaagacacgccaaagatctgtttgacgagactgactccatg
aacgtggacgatgagattactgtggaagacaaggtgggcccggtgatcacggagagcttt
tccagcgttagcggtgcgtgcgactggccctccagctcttcgctgacggcgcgcatgcgg
cggctgatcacggcgtaccaacgcagctacaggcaggtgcagctgaagatcgaagcggag
gcgaagggcgaccgcaggcgcaggcgctgcgaacaggccagcaagctgaaggagatcgca
cggcaggagcgccagcagaggtggacgcgtagggaagaatgcgacttctaccgcgtggtt
tccactttcgcagtgcaaaagtttaaaaaggagccaggacttcctgaggcaggagagcct
gagtttgactggaaccgcttccgtacctttgctcgtctggacaagaaaacagacgagagc
ctcagtcgatatttccgctcttttgtcgctatgtgccggagagtttgccacctgcgcact
ggccgcgaagatgtagtcgagcatccccagaatgtggcccccatcactgaggagcgtgct
tcccgtaccctttaccgcatcagcctgctgcgtcgcctccgtgagcgagtcctgccgcat
ccactgctggcggagcgtctttctctggctccgaacacctccgagctgcccgcctggtgg
aatattcccgaacacgaccatcagctgatgctcgggtcgtccctgcacggcgtcagccgc
accgagctctccatcttcccagaccctcagttctccttcaaccaggctcgggatgagttt
gtcctgacccagcagtctgctccacctccgcctatcatgcccatcatgcccaacatcctg
ccaaaggtggaggaggacatgcctgttgtgaaagaggagccggcttacgaggactccctg
ctgcttggaggagaaatcagtgccgtcctgcagagcacgcccagaagtcatcatgatggc
aaggagcgagggcagggctggaacatcaagaggagcaaggggagggttgggaaatcagga
gagaggaagggggagggaggctcggattccgattctgactctgattcaggctcgtcgtcg
tctgggcgatcaggcagcagcgatgagagtggagagagtgatgaagaaagagcacgcatg
aagatgtgtgacgtggacggagacaacagtttactctctatgagcacatctcaggacggc
cttcttccccccgatcctctcagagtggattggcccaaggaccgcgtgttgatcaaccgc
ctggacagtttgtgtacgctgacgctgagcggtcagtggcccacggggcggcgctacctg
cctgaggctcagctcgccccgagctcagagctggggggagacgagatggcgttcacgagg
ttgaaccgaaaacccggcggcacaccaggggcccccggggaggagggtgaagatggggag
ttcaccgtcaagctccttaaggaggaggggctgaagctgaccttctctaagcacgccatg
atgcccaacggatcagggggagagggaagtgcccgcaagaagcgcaaggaccaagactta
tcagacccagatggactcaatgatcctctggagaaaactcctcggcgcagggaccccccc
acctggttgaaggagaacccagattatgaggtggagggagacatgttggagcttcttgag
aacaggagcaagaggaagaggaggaggagggcagacaaagccctgacaggcagtgagaag
gtcaaagtcattaacatgcggacaggaaaaaaggttggagctgctttctgtccgatgctg
caagacctgaaggaatacctgcaggagaaccctgacaacgctgtagcagccgactggtct
gagactgttcggagctctgtacgtactaaagatgttattacgagcatcagagccggtgac
accagcagaataaataaactgatcaggaaagctggctctgtcatcggcatcaagctggac
acctttgaagctgtggtggagaggaggacactgaacaggctgttgtccatcatggataac
cccacccatgatctccacctgcagctggacagttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (73)   
   KEGG ORTHOLOGY (1)   
   RefGene (69)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (81)   

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