KEGG   Notothenia coriiceps (black rockcod): 104957023
Entry
104957023         CDS       T04920                                 
Symbol
usp49
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 49
  KO
K11834  ubiquitin carboxyl-terminal hydrolase 44/49 [EC:3.4.19.12]
Organism
ncc  Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ncc01002]
    104957023 (usp49)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ncc04121]
    104957023 (usp49)
Enzymes [BR:ncc01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     104957023 (usp49)
Peptidases and inhibitors [BR:ncc01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   104957023 (usp49)
Ubiquitin system [BR:ncc04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    104957023 (usp49)
SSDB
Motif
Pfam: UCH zf-UBP UCH_1 PRY
Other DBs
NCBI-GeneID: 104957023
NCBI-ProteinID: XP_010782922
UniProt: A0A6I9P424
Position
Unknown
AA seq 696 aa
MDRCKHVGRLRLGHDHSVLNPQKWQCVDCSTTDSVWACLKCSHVACGRFMEEHSLKHFQE
SHHPLVMEVRELDVFCFACGDYVLNDNAEGDLKLLRGALSTVRSPGRRSLRSATMGVCTP
WVGDTGPKPAMQLASRHRRKALLGKMLRTWIGKHQELQNEREEKLEEARRQKKEVKKRLM
EELGGVPPRKSARLLTQAPRSAITLIPRKFREPPERLPPASKKPSLLTLSRKTPQNGRAA
KLRRYYSSHTVTRRRPAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLTLDLCETEEL
LAKTNQAQGMTAVTGVVSSGTAALPGSPLGRVGKAGSWNLPVGKKESAPPTPQPSELVQP
KEPRCSTRQQMSLCHELHTLFRVMWSGRWSLVSPFAMLHSVWNLIPAFRGYDQQDAQEFL
CELLDKVQQELDTEGSKRRIVIPITKRKLSKQVLKVLNTIFHGQLLSQVTCLSCKHKSNT
VEPFWDLSLEFPERYHSIDKSSGSTAYQRSCTLIEMLSKFTEMEALEGSIYACNHCNKRR
RKTSHKPLVLSEARKQLLIYRLPQVLRLHLKRFRWSGRNHREKIGVHVAFDQVLNIKPYC
CTGSGHPVHRGGYTYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSEMKVCSVEE
WSGAAVPATLIPLSSVVYCKNTCHKCMVIWVSPDGY
NT seq 2091 nt   +upstreamnt  +downstreamnt
atggatcgttgtaagcacgtggggcgccttcgcctgggccacgaccattctgtcctcaac
ccacagaaatggcagtgtgtggactgcagcaccaccgattcagtgtgggcctgcctcaag
tgctcccacgtggcctgtggacgcttcatggaggagcactcgctcaaacactttcaggag
tcacaccacccactggttatggaggtgcgtgagctagatgtgttctgttttgcctgtgga
gactatgtactcaatgacaacgcagagggagacctcaaactcctcagaggggcgctctcc
acagtgcgcagcccagggagacgctcactacgctcagcgaccatgggggtttgcaccccc
tgggttggagacactgggccaaagcccgccatgcagctggcctctcgtcacaggaggaaa
gcacttctagggaagatgcttcggacatggatcggtaaacaccaggagctgcagaatgag
cgggaagagaaacttgaggaagctagaagacaaaaaaaagaggttaaaaagagactcatg
gaagagcttggcggtgtccctcctagaaagagtgctaggcttcttactcaggcgccacgt
tcagccatcacactcattcctcgcaaatttcgcgaacctccagaacgcctacctcctgct
tccaagaagccttcccttcttaccctgtcccgtaagacacctcagaatggcagagctgct
aaactgaggaggtactactcctctcacacagtcacccgccggagacctgctccaggtgtc
actggtctgcgcaatctggggaacacatgctacatgaactcaatattgcaagtgctgagc
cacctgcagaaattcagggagtgttttctcaccttggacctgtgtgagactgaggagctg
ctggccaagaccaaccaggcccagggcatgacggccgtgacgggtgtagtcagcagtggg
accgcagcgctgcctgggagccctctgggacgcgtaggtaaggccggcagttggaattta
cccgttggcaaaaaagaaagtgctcctcctaccccgcagccttcagagttggttcagcct
aaggagcctcgctgctccacccgccagcagatgtctctgtgccatgagttacacacactt
ttcagggtcatgtggtcaggccggtggtccttagtgtctccattcgccatgctgcactcg
gtgtggaacctcatcccagctttccggggctacgaccagcaggacgcccaggagttcctg
tgcgagctgctagacaaggtgcagcaggagctggacacagagggctccaaacgcaggata
gtgatccccatcacaaagaggaaactatccaagcaagtgctaaaggttcttaacaccatc
ttccatgggcagctactcagccaggtgacgtgtctgtcctgtaagcacaagtctaacaca
gtggagccattttgggatttgtctttggagtttccagagcgataccacagcatagacaaa
agctcaggctctacagcttaccagcgcagctgcaccctcattgagatgttgtccaagttt
accgagatggaggctctcgaaggcagcatctatgcctgcaaccactgcaacaaaagaagg
cggaaaacatcccacaaacccttagttctgtcagaggctcgtaagcagcttctgatctac
cgtttacctcaggttctacggctgcacctcaaacgcttcagatggtcggggagaaaccat
agggagaaaatcggcgtccatgtggccttcgaccaggttctgaacatcaaaccgtactgc
tgcacaggctcaggtcaccccgtccacagaggaggctacacctacgatctgtctgctgtt
gttatgcaccatgggaaaggctttggctcagggcactacaccgcatactgctacaacaca
gaaggaggtttctgggtccactgtaatgactctgagatgaaggtgtgcagtgtggaggag
tggtcaggcgcggccgtgccagcgactctgatccccctgagttctgtcgtgtactgtaag
aatacctgtcataaatgtatggtcatatgggtttcgcctgatggttattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (44)   

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