KEGG   Notothenia coriiceps (black rockcod): 104957597
Entry
104957597         CDS       T04920                                 
Symbol
ddx11
Name
(RefSeq) probable ATP-dependent RNA helicase DDX11
  KO
K11273  chromosome transmission fidelity protein 1 [EC:5.6.2.7]
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    104957597 (ddx11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ncc03036]
    104957597 (ddx11)
Enzymes [BR:ncc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     104957597 (ddx11)
Chromosome and associated proteins [BR:ncc03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    104957597 (ddx11)
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD ResIII
Other DBs
NCBI-GeneID: 104957597
NCBI-ProteinID: XP_010783541
UniProt: A0A6I9PBX3
Position
Unknown
AA seq 888 aa
MENGRDTFPFPYQPYNIQEQFMQALYSALDQGKVGIFESPTGTGKSLSLICGALSWLTDF
EEKRKQESAALLHEGEAALSTVTAPSSTSSSSAGPDWITDFVQKKADRDLVSKLKDEELK
RKKREERLEMIRNNVQLKYAMKRKSCEDEEAIKLLQLSKEEQTEPQGDQEDEELIIAEYE
SDDESKTKSRFSATEEDDDLVEEHVTKIYYCSRTHSQLAQFVHEVQKSPFSKDISLVTLG
SRQNLCINDEVRRLGSSQRINDRCLEMQKNKHDKHQEEGVKRKRGPAKSVCPYNKATALQ
QMRDDVLGKVHDIEQMLKLGRETHSCPYYATRLSVPPAQLVVLPYQILLHEATRKAAGIQ
LKGQVVIIDEAHNLSDTLSCIHSAELTGAQLCRAHSQLTQYSDRYKSRLKAKNLMYIKQI
LFVVEGLVRVLGGKVGQNPQTQTTQTGTEVLTINNFLFKAQIDNINLFKLPRYFEKSLIS
RKLGGFVEKYAGSGVSLHTQNSIKENRRTEGLNRYLQTLQSNPTPGSSADQQGSEAEKVL
SASPMMQVEGFFMALTNSNTDGRVVVQRQGTVSESSVKFLLLNPAVHFAQVLEQSRAVII
AGGTMQPVSDFKQELLFSAGVGEERITEFSCGHVIPPENILPLVLCRGPSGQELDYTFQS
RDTPRMMDETGRILSNICNVVPGGVVCFFPSYEYSRRIVSHWEASGALSRLANRKKIFQE
PKKANQVEQVLSEFSRCIQRCAADPGRLTGALLFSVVGGKMSEGINFSDDLGRCVVMVGM
PYPNIKSPELQEKMSYLDKYLPHNGGKSPGQALIENQCMKAVNQSIGRAIRHRGDYSSIV
LCDRRYARPATLSKLPEWIKERTSTHTTFGPAFAALRKFFLEKKQKQV
NT seq 2667 nt   +upstreamnt  +downstreamnt
atggaaaatggcagggacacatttccatttccctatcagccctacaacatccaggagcag
tttatgcaagccctgtacagtgctcttgaccagggcaaagttggaatctttgaaagtcca
actgggacgggcaagtctctgagtctgatatgtggagcgctgagctggctcactgacttt
gaggagaagaggaaacaggagtcagctgctctgctgcatgaaggagaagcagctctctcc
actgtcactgctccatcctccactagcagctcatctgcagggccagactggatcactgat
tttgttcaaaaaaaagcagatcgtgatttggtgtcaaagttgaaggacgaagaattgaaa
agaaagaagagggaagaacgattagaaatgatcagaaataacgttcaactgaagtatgca
atgaaaagaaaaagctgtgaagatgaagaggcaataaaattgctccagctcagtaaagag
gaacaaaccgagccccaaggagatcaagaggacgaggagctcatcatcgcagaatatgag
agcgatgacgagtcaaagaccaagagcagattttctgctactgaggaagacgacgatctg
gttgaagaacatgttactaagatttactactgcagtcgcactcactcccagctggcccag
tttgttcatgaggttcaaaagagtcccttcagcaaggacatcagtctggtcaccctgggc
tcacggcagaatctgtgtatcaacgacgaggtgcgacgccttggcagcagccaacgcatt
aatgaccgctgcttggagatgcagaaaaacaaacatgacaagcatcaggaagagggtgta
aaacgtaagcggggcccagcaaagagtgtgtgtccctataataaagctacggctctgcag
cagatgagggacgacgttctggggaaggtccacgatatagagcagatgctgaagctgggc
agagagacacactcatgtccgtactacgccacgcgcctctctgttccccctgctcagttg
gtggtgctgccctatcagattttgcttcatgaagcaacaaggaaggcagcagggatccag
ctgaagggtcaggtggtgatcatagatgaagcgcacaatcttagtgacacgctctcctgt
atacacagtgccgagctcactggagcgcagctatgccgtgcccactcgcagctcacccag
tattctgaccgctacaagagcagactgaaggcaaagaacctcatgtacattaaacagatt
ctgtttgtggttgaagggcttgtccgggtgctgggaggtaaggtggggcagaatccacag
acccagactacacaaacaggaacggaagtgctcaccattaacaacttcctcttcaaggct
cagatcgacaacatcaacttgtttaagttgccgagatactttgagaaaagcctgatcagc
agaaagctgggcggctttgtggagaagtatgcaggatcaggagtgagtctgcacactcag
aactccatcaaggagaaccgccgcacagaaggcctgaaccgctacctgcaaacgctgcag
agcaacccaacgccaggatcttcagctgaccagcaggggtcagaggcagagaaagtgctc
tctgcatctcccatgatgcaggtggagggtttcttcatggctctcaccaacagcaacaca
gacggcagagtggtggtgcagagacaaggtactgtttcagagagcagcgtgaagttcctg
ctgctgaatccagcggtgcacttcgctcaagtgctggagcagagcagagccgtcatcatc
gccggaggaaccatgcagcctgtttcagacttcaaacaagagctcctattttctgccgga
gtgggagaagagcgcatcactgagttttcctgtggtcatgtaattcctccggagaacatt
cttcccctcgtcttgtgcagaggtccctctggtcaggagctggattatactttccaaagc
agagacactccacgcatgatggatgagacggggcgaattctctccaacatctgtaacgtg
gtccccggcggcgtcgtgtgcttcttcccttcctacgagtactccagacgcatcgtttct
cactgggaggccagcggggcactgagtcgtctcgctaacaggaagaagatcttccaggag
ccaaagaaagccaaccaggtggagcaggtgctgagcgagttctctcgctgtatccagagg
tgtgctgcagatcccggcaggctcacgggagcgttgctgttctctgtggtcggaggaaag
atgagtgagggcatcaatttctcagatgacctgggcaggtgtgtggtgatggtggggatg
ccatatcccaacatcaaatccccagagctgcaggaaaagatgtcctacctggacaaatac
ctgcctcacaatggaggaaagagccccggccaagcactgatagaaaaccagtgcatgaag
gctgtcaatcaatccataggaagagctatccgtcaccgtggcgactattcctccatcgtg
ctgtgtgacagacgttacgctcgacctgcgacgctctctaaactcccagagtggatcaaa
gagcgcaccagcacacacaccacctttggccctgcttttgctgccttacggaagttcttc
ctggagaagaagcagaagcaggtgtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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