KEGG   Notothenia coriiceps (black rockcod): 104958221
Entry
104958221         CDS       T04920                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like
  KO
K08601  ubiquitin carboxyl-terminal hydrolase CYLD [EC:3.4.19.12]
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04217  Necroptosis
ncc04622  RIG-I-like receptor signaling pathway
ncc04625  C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    104958221
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    104958221
   04625 C-type lectin receptor signaling pathway
    104958221
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ncc01002]
    104958221
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ncc04121]
    104958221
Enzymes [BR:ncc01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     104958221
Peptidases and inhibitors [BR:ncc01002]
 Cysteine peptidases
  Family C67
   104958221
Ubiquitin system [BR:ncc04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    104958221
SSDB
Motif
Pfam: CYLD_phos_site CAP_GLY
Other DBs
NCBI-GeneID: 104958221
NCBI-ProteinID: XP_010784251
UniProt: A0A6I9PE86
Position
Unknown
AA seq 636 aa
MSSALWSQEKPSGGFREDWRFYMVIKECTVEKTPQKTLRIPRGSLGQACQERNSLGRTLP
PNKGKKSLRILDQTNVVLSLDERDVLELDEKLAELLFPITNCEERYALLCNKSRLERVRD
IDCGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGIWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVALDKLELWEDDDDEALGELEVDHVTLVEDDQDFPPLEINSRVLVQTR
DGPERGTIIFCDLLPGNESLGYYVGVDMDNPIGDWDGMIDGKLLCNFASLEHTRLVPICD
VMPDYSMQDQRLQKHSFAPRGTNSEKSSSGQSKPKSKGLGHQCGSRSKSEFYYTLNGSSV
DPPAQSKSKSTWYIDEGKNGNSWDVNPLTGKLLFTTSYCLHQATVYNKLLFTTSYCLQQA
TVYNKLLFTTSYCLQQATRRRYEWSRSRPLARSSAPLRVSPYWGVSPPQEEVEVVSRVEA
GPTRRTPAAPGAASAATARATEGVHLHPRRKAHRHGKLSVPKELQEGSGRQGSFPRQRME
LFAVLCIETSHYVAFVKYGSADSSWLFFDSMADRDGGQNGFNIPQVSPCPEVEAYLKMSP
EELHSLDPKSIVGQARRLLCDAYMCMYQSPTMSLYK
NT seq 1911 nt   +upstreamnt  +downstreamnt
atgagctccgccctgtggagccaggagaagcccagcgggggcttcagggaggactggcgc
ttctacatggtcatcaaggagtgtacggtggagaagaccccccagaagaccctgaggatc
ccccgcggcagcctcggtcaggcctgccaggagcgcaacagcctggggagaacgctgcct
ccaaacaagggcaagaaaagtctccgcatcctggaccagaccaacgtggtgctgagcctg
gacgagcgggacgtcctggagctggacgagaagctggcagagctgctgttccccatcaca
aactgcgaggagcgctacgccctgctctgcaacaagtcccggctggagcgagtgcgtgat
attgactgtgggtccaaggtgagggtccagctgcgctcgggggacgaacctctgcccggg
gtggtccgcttcaaaggctcgctgctgcccgatagagcgctctctggaatctggttcgga
gtagagctgctggaggagggccggggccagggcttcaccgagggatcctaccagggacgc
caactcttccgctgtgaggatgagtgcggtgtgtttgtggccctggacaagcttgaactc
tgggaggatgacgatgacgaagctttgggtgagctggaggtggaccacgtgactctggtg
gaagacgaccaggactttcctcctctggagatcaactccagggtcctggtgcagaccagg
gacgggccggagagagggaccatcatcttctgtgacctgctgcccgggaatgagagcctg
ggctactatgtgggagtagacatggacaatcccatcggggactgggatggtatgatcgat
gggaagctgctgtgtaattttgccagtttggagcacactcgactcgtacctatctgtgac
gtaatgccagattattccatgcaggaccaaaggctgcaaaagcacagttttgcccccaga
ggcaccaacagtgaaaagtcgtcctctggccaaagcaaaccaaagagcaaaggattaggt
catcagtgtggcagtagaagcaagtctgagttttactatactttaaatggcagctctgtt
gacccccccgcccagtccaaatccaaaagcacatggtacattgatgaaggtaaaaacggg
aactcatgggacgtcaaccctctcaccggcaagctactgtttacaacaagctactgttta
catcaagctactgtttacaacaagctactgtttacaacaagctactgtttacaacaagct
actgtttacaacaagctactgtttacaacaagctactgtttacaacaagctacgagaagg
cgttacgagtggtcgaggtcgcggccgctcgcgaggtcgtccgcccccctccgggtgtcg
ccgtactggggcgtgtctccgccccaagaggaagtggaggtggtctctcgggtggaggct
ggcccgacaaggagaacccccgcagctcccggagccgcctccgccgccactgcccgagcg
accgagggggtccatctccacccgaggaggaaagcccaccggcacgggaagctgtccgtc
cccaaggagctgcaggagggctcggggcggcagggctcgttcccccgccagaggatggag
ctgttcgccgtgctgtgcatcgagaccagtcactacgtggccttcgtcaagtacggcagc
gcggactcctcctggctcttcttcgacagcatggcggaccgcgacggagggcagaacggc
ttcaacatcccgcaggtgtccccctgccccgaggtggaggcgtacctgaagatgagcccc
gaggagctgcactccctggaccccaagagcatcgtgggccaggcccgccgcctgctctgc
gacgcctacatgtgcatgtaccagagccccaccatgagcctgtacaagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (33)   

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