KEGG   Notothenia coriiceps (black rockcod): 104961227
Entry
104961227         CDS       T04920                                 
Name
(RefSeq) LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase TRIML1
Organism
ncc  Notothenia coriiceps (black rockcod)
SSDB
Motif
Pfam: PRY SPRY zf-RING_UBOX zf-B_box zf-C3HC4 zf-C3HC4_2 zf-C3HC4_4 zf-RING_2 zf-C3HC4_3 zf-RING_5 U-box zf-RING_6 zf-RING_10 TRAF3_RING V_ATPase_I zf-Nse HATPase_c CENP-O Borrelia_P83
Other DBs
NCBI-GeneID: 104961227
NCBI-ProteinID: XP_010787773
UniProt: A0A6I9PL20
Position
Unknown
AA seq 546 aa
MSAASCLFTEDQFLCSICLDVFTDPVSTPCGHNFCKACISEHWDRNVPSQCPNCKXVFNI
KPELLVNTFISEMAAQFRQSAQQKASSSSSEQQVVKPGEVPCDVCTGTRLKALKSCLVCL
ESYCETHLEPHLTRAGLKKHQLIDPEENLESRMCVKHDKLLELFCQTDQVCVCMLCTYSD
HKTHDVVPLKEGYEGKKAELGKTEAEIQQMIQKRRLKIQEMNRSVELSKEGADREIADGV
QVFTALKESVERSQAELMDTIKEKQRETEEQAEGFIKELEQEVSELKKRSSEVEQLSRSE
DQLHLLQSFTSLNAAPPTKNWTEVRVRPPSYEGTVRRAVTQLEETLRKQMKKLLEVELKR
VQQSEVEVTLDPDTANPYLILSDDGKQVKPGDVKKNLPNNPERFDTCARVLAKQSFSSGR
FYYEVQVKGKTGWVLGVVRESINRKGDITMTPQDVYWIIWLMENEYKACAGPSVRLSLKS
QPEKVGVFVDYEEGLVSFYDVDAAALIYFFTGCCFKEKLYPYFGPSLNYDGKNSSPLIIS
PVNHTE
NT seq 1641 nt   +upstreamnt  +downstreamnt
atgtctgctgccagctgtctgttcactgaagatcagtttctgtgctccatctgtctggat
gtgttcactgatccagtcagcacaccatgtggacacaacttctgtaaagcctgcatctct
gaacactgggatagaaatgtcccgagtcagtgtcccaactgtaaanaggttttcaacata
aagcctgagctgctggtcaacacgttcatctctgagatggctgctcagttcagacagtca
gctcaacagaaagccagcagcagcagctcagagcaacaagttgtcaaaccaggagaagtt
ccctgtgacgtctgcactggaaccagactgaaggccctgaagtcctgcctggtgtgtctg
gagtcctactgtgagactcacctggagcctcacctgacaagagcaggtctgaagaaacat
cagctgatcgaccctgaggagaacctggaaagcaggatgtgtgtgaagcacgataaactg
ctggagctgttctgtcagaccgaccaggtgtgtgtctgcatgctctgcacctattcagac
cacaagacacatgatgtagttcctctgaaagaaggatatgaaggaaagaaggctgagctg
gggaagacagaggctgaaatccagcagatgatccagaagagacgactgaagattcaggag
atgaatcgctcagtggagctcagtaaggaaggagcagacagagagatagcagatggtgtt
caggtcttcaccgctctgaaggagtctgttgagagaagccaggccgagctcatggacacc
atcaaagagaagcagagagagacagaggaacaggctgaaggcttcatcaaagagctggaa
caggaagtctctgagctgaagaagagaagctctgaggtggagcagctctcacgctctgaa
gaccagctccacctcctccaaagcttcacgtccctgaacgctgctccacccaccaagaac
tggacagaagtcagggtccgtccaccttcatatgaggggactgtgaggagagctgtgact
cagctggaggagacgctcaggaaacagatgaagaagctgcttgaggtggagctgaagagg
gtccagcagtctgaggtggaggtgactcttgatcctgatacagcaaatccctatctcatc
ctgtctgatgatggaaaacaagttaaacctggtgatgtgaagaagaatctcccaaacaat
ccagagagatttgatacttgtgctcgtgtcttagcaaagcagagtttctcttcaggtaga
ttttattatgaggttcaggttaaagggaagactgggtgggttctaggagtggtcagagag
tcgatcaacaggaagggagatatcacaatgactcctcaggatgtttactggataatatgg
ctgatggaaaatgagtacaaagcttgtgctggtccttcagtccgtctctctctgaagtct
cagcctgagaaggtgggggtgtttgtggattatgaggagggtctggtctccttttatgat
gttgatgctgcagctctgatctacttcttcactggctgctgcttcaaagagaaactctac
ccttatttcggtccaagtcttaattatgatggtaaaaactcttctccgctgatcatctct
cctgtcaatcacactgagtag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (19)   
   Pfam (19)   
All databases (42)   

Download RDF
DBGET integrated database retrieval system