KEGG   Notothenia coriiceps (black rockcod): 104964301
Entry
104964301         CDS       T04920                                 
Name
(RefSeq) autophagy-related protein 2 homolog A-like
  KO
K17906  autophagy-related protein 2
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04136  Autophagy - other
ncc04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    104964301
   04136 Autophagy - other
    104964301
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncc04131]
    104964301
   03029 Mitochondrial biogenesis [BR:ncc03029]
    104964301
Membrane trafficking [BR:ncc04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    104964301
Mitochondrial biogenesis [BR:ncc03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    104964301
SSDB
Motif
Pfam: ATG2-VPS13_C ATG2_CAD VPS13_DH-like
Other DBs
NCBI-GeneID: 104964301
NCBI-ProteinID: XP_010791349
UniProt: A0A6I9PJV9
Position
Unknown
AA seq 846 aa
MIIYLVFLFPRPMYLPLRVLFTAESFSLSSNIIVDTATFHLRFILDDSALYLSDKCETDV
VDLRRDYVCVLDIDLLELAITTWKGSDTGKLSQPLFELRCSNNVVHVHTCADSCAALVNL
LQYLVSQGDLHPPPRHTSPTEIAGQKLPLSESPAAMLPCPPAETAEINQYDLADALIDTE
KSHREESSDPGSPSMPRGSPVSVYLFPGEAPKRSPSVLLVEDAQLDGLVASATEAQADMM
SEEGSDGSTDNDDFCILEAPGMGIPPRDGEPVVTVLSEGPIKLKESHFSRPRGSSDLLRA
PSRFPVPQSRVVLREISVVWHLYGGKDFGGKPMSIHAQNTNRGRSAPAGARGSPSRSATT
SRPQNSWRWAGGSGRQHQLLMEIQLTKVSFQHESYPGAVAGQEGEGFLLAGVGPGGEQPL
SRQVFIVQELEVRDRLASSQLNKFLYLYTSESMPRRAHSNMLTVKALQVCPESGLGGPEC
CLRISLLPLRLNIDQDALFFLKDFFSSLASYVNPYLPVDPASEVKADPSQKAPEEAEAGL
GPDLSASVETTFSEQSSSSAGSTSSSDQPIYFREFRFTSEVPIWLDYQGKHVVIEQGTFA
GILIGLAQLNCSELKLKRLCCRHGLLGVDKVIQYAVTEWLTDIRKNQLPGILGGVGPMHS
VVQLFHGVRDLFWLPIEQYRKDGRIIRGLQRGAASFGTSTASAALELSNRLVQAIQATAE
TVYDILSPTPPLNRFAITEGRAPSSRPRRAAQPADLREGVAKAYDTVREGVIDTAQTLCD
VASRGHEQKGLPGAVGGVLRQIPPTVVRPLIVASEATSNLLGGMRNQIKPDARKEDFLKW
RTDGQE
NT seq 2541 nt   +upstreamnt  +downstreamnt
atgatcatttatttagttttcctgtttcccagacctatgtacctgccgctgcgcgtgttg
ttcacagcggagtccttctctctgtccagtaacatcatcgtagacacggccacctttcac
ctcagattcatcttggatgactctgctctctacctctctgacaaatgtgagactgacgtc
gtggacttgaggagagactatgtgtgtgttctggacattgacctgctggagctcgccatc
accacatggaaaggcagcgatacgggcaagctgtctcagcctctcttcgagctccgatgc
tccaacaacgtggttcacgttcacacctgtgctgattcctgcgccgccctggtcaacctg
ctgcagtacctcgtctcgcagggggacctgcaccccccgccgcgacacacctcacccacc
gaaatcgctggccagaaattaccactgtcagaaagtcctgcggcgatgctgccctgccct
ccagctgaaactgcagagatcaaccagtacgacctcgctgatgccttaatcgacacggag
aagagccaccgagaagagagctcagatcctggttcaccctccatgcccagaggctcgccg
gtctccgtctacctgttcccgggcgaggctccgaagcgaagcccctccgtcctgctggtt
gaggacgctcagcttgatggactggttgcctcagcaacagaggcgcaggcagatatgatg
tccgaggaaggatccgacggctcgaccgacaacgatgacttctgcatattggaggcccct
gggatgggcattcctccgcgggacggggagcccgtggtgacggtgttgtccgagggcccc
atcaagctgaaggagagtcacttctccagaccccgaggcagctcagacctgctgcgagcg
ccgagccgcttccccgtgccgcagagcagagttgtgctgagggagatctccgtggtctgg
catctctacgggggcaaggactttgggggcaagcccatgtcaatacatgcccaaaacact
aacagaggtcgttcagcccccgctggagctcgggggtccccgtctcgctcggccaccacc
tcccgtccccagaactcgtggcgctgggccggaggcagcggccgccagcaccaactgttg
atggagatccagctcaccaaggtgtccttccagcatgagtcctacccaggggcagtagca
gggcaggagggggaggggttcctgttggctggcgtgggtcccgggggcgagcagcccctc
tccagacaggtgttcatcgtccaggagctggaggtccgagaccgactggcctcctcacaa
ctcaacaaattcctttacctctacaccagcgagagcatgccgcgccgagcccactccaac
atgctgacggtgaaggccctgcaggtctgtccagagtctggcctcggtggaccggagtgc
tgtcttcggatcagcctgctgcctctacgtcttaacatcgaccaggacgcactgtttttc
ctgaaggactttttcagcagtctagcttcctatgttaacccttacctgcctgtggaccct
gcatccgaagtgaaagcagacccctcccagaaggcccctgaggaggcggaggctggtctg
ggacctgacctctcagcgtctgttgaaaccaccttcagcgagcagagctcctcctctgcc
ggctccacctcctcctccgaccagcccatctacttccgggagtttcgattcacctctgaa
gtgcctatctggcttgactatcaaggcaaacatgttgtcattgaacagggaacgtttgca
ggaatcctgattggtctcgcccagttgaactgctctgagctgaagctgaagaggctctgc
tgcagacacggtctcctcggtgtggataaagtgatccagtacgccgtcactgagtggctg
acggacatcaggaagaatcagctgccgggcattctgggaggagtgggtcccatgcactca
gtggtccagctgttccacggagtgagggatctgttctggttgcccatagagcagtacagg
aaggacgggcgtattatccgaggtctccagaggggggcagcctccttcgggacgtccaca
gcttcagctgctttggagctcagcaacaggctggtgcaggccatacaggccacagcagag
acggtgtacgacatcctgtctcccactccccccctgaaccgctttgccatcacagagggc
cgggccccctccagccggccccgcagagccgctcagcccgcagacctgcgagagggcgtg
gccaaggcctacgacaccgtcagagagggagtgattgacacggctcagaccttgtgcgat
gtagcatcccgcggccacgaacagaagggtctgcccggcgctgtgggtggcgtcctgcgg
cagatcccgcccaccgtggtccgacctttaatagtggcctctgaagcaacctccaatctg
ctcggtggcatgaggaaccagatcaaaccagacgcccggaaggaggacttcctgaagtgg
cgcaccgacggccaagaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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