KEGG   Notothenia coriiceps (black rockcod): 104965884
Entry
104965884         CDS       T04920                                 
Name
(RefSeq) chondroitin sulfate synthase 3-like
  KO
K13499  chondroitin sulfate synthase [EC:2.4.1.175 2.4.1.226]
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc00532  Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ncc01100  Metabolic pathways
Module
ncc_M00058  Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
    104965884
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:ncc01003]
    104965884
Enzymes [BR:ncc01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.175  glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
     104965884
    2.4.1.226  N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
     104965884
Glycosyltransferases [BR:ncc01003]
 Glycan extension
  O-Glycan
   104965884
SSDB
Motif
Pfam: CHGN Glyco_transf_7C Glyco_tranf_2_2 Fringe Glycos_transf_2 DUF1194
Other DBs
NCBI-GeneID: 104965884
NCBI-ProteinID: XP_010793221
UniProt: A0A6I9Q426
Position
Unknown
AA seq 620 aa
FDPTAGEKLEGFLRSLNSSKPQYLGQTGLGMAEELGRLALEPGENFCMGGPGMIFSREVL
RRMVPHISTCLREMYTTHEDVEIGRCVRRFGGTQCVWSYEMQQLFYENYEHNKRGFIEEL
HSSKIHNAITLHPNKKPAYQYRLHSFMMSREISRLCYQSILLHREGLMMSHLSDSEVLWE
DQQLGSSPSYMRFKPGDRNDVIEWDFLTSRHIYSAAENKVARQSLGNLLRTAMEDVIRQV
MEMINENSKTRGRVIDFKEIQYGYYRVDPMHGAEYIIDLLLLYKKHKGRKITVPVRRHAY
LQQSFSRPFFTETEELDVSELVAAINSESQSLSFLSNSLKFLSPFQVYESNREMWEQSQR
KVNILVPLSGRYENFIRFMENFEKVCLIPKQNVKLSIILVDNENMEKHAPLMKDYSRKYP
KADLSIIPMTGNFSRGLALELGSSQLDNDSLLFFCDVDLIFSGDALQRCRENAVQGKQVY
FPVVFSQYNPKIVYSEKAPRENKFVLTKKSGFWRDYGFGITCVFKSDLIKAGGFDTSILG
WGLEDVDLYTKVINSGLKVLRSQEPGIVHLYHPVHCNTSLEQKQYKMCLGSRASTFASTM
QLAELWLEKHVETGYNRTAS
NT seq 1863 nt   +upstreamnt  +downstreamnt
tttgaccctactgcaggtgagaagctggaggggttcctgcgctccctgaacagcagcaag
cctcagtacctgggccagacgggcctgggtatggccgaggagctgggccgcctggctctg
gagcccggagagaacttctgcatggggggccccgggatgatattcagtcgagaggttctc
cgcaggatggtccctcacatcagcacctgtctgagggagatgtacaccacccacgaggat
gtggagattggccgctgtgtgcgacgctttggaggaacacagtgtgtgtggtcgtatgag
atgcagcagctcttctacgagaactatgaacacaacaagagaggtttcattgaagaactt
cacagcagcaagatccacaacgccattacactccaccccaacaagaagccggcctaccag
taccgtctgcacagcttcatgatgagccgggagatctccagactctgttaccaaagcatc
ctgctgcaccgggagggcctgatgatgagtcacctgagtgatagtgaagtgctgtgggag
gaccaacagctgggctcctctccttcctacatgcgctttaaaccaggcgataggaatgat
gtcattgagtgggatttcctgactagtcgccatatttattctgctgcagagaacaaagtg
gcccggcagagccttggcaacctgcttcgtactgcaatggaagacgttatacgccaggtc
atggaaatgattaacgagaattccaaaacacgcggccgtgtaatcgactttaaggagatc
cagtacggctattacagggtggatcccatgcatggcgcagaatacatcatagacttactg
cttctctacaagaaacacaagggacgtaagataacagtgcccgtgagacgacacgcttac
cttcagcagtcgttcagtcgtcccttcttcactgaaactgaagagttagacgtgtctgaa
ctcgtcgccgccatcaactctgagtcacaatccctgtctttcctgtccaactctctgaag
tttttgtcacctttccaggtctacgaatcaaacagggagatgtgggagcagagccaaaga
aaagtcaacatcctcgtcccattatcaggtcgctacgagaactttatccgctttatggag
aactttgagaaagtgtgtttgatacctaaacaaaatgttaagctctccatcattctggta
gacaatgaaaacatggaaaaacacgctccgttaatgaaagactacagcaggaagtatccc
aaagctgacctgtcaatcatccccatgacaggcaacttctcacgaggccttgctcttgag
ctgggctcctcacagctggataacgactccttactcttcttctgcgatgttgatctcatc
tttagtggggatgccttgcagcgctgcagagaaaatgctgtccaagggaaacaagtctac
ttccctgttgtctttagccagtacaaccccaagatagtgtactctgagaaggccccgaga
gaaaacaaatttgttctgaccaagaaaagtggtttctggcgggattacggatttggaatc
acctgtgttttcaagagtgatttgataaaagctggaggtttcgacacctcgatattaggc
tggggattggaagacgtagacttgtacacgaaagtgattaattctgggttgaaagtgtta
cgcagtcaagaaccaggaattgttcacctttatcatcctgtccactgcaacacaagtctt
gagcagaagcaatacaagatgtgccttgggtcgagagcaagtacgtttgcatcgacaatg
cagttagcagagctgtggctggagaaacacgtagagacgggctacaacagaaccgcatcc
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (8)   
   KEGG ENZYME (2)   
   KEGG REACTION (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (45)   

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