KEGG T04920: 104966612

Notothenia coriiceps (black rockcod): 104966612

Entry

104966612         CDS       T04920

Symbol

bdp1

Name

(RefSeq) transcription factor TFIIIB component B'' homolog isoform X1

K15198

transcription factor TFIIIB component B''

Organism

ncc Notothenia coriiceps (black rockcod)

Brite

KEGG Orthology (KO) [BR:ncc00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ncc03021]
    104966612 (bdp1)
Transcription machinery [BR:ncc03021]
Eukaryotic type
  RNA polymerase III system
   Basal transcription factors
    TFIIIB
     104966612 (bdp1)

SSDB

Motif

Pfam:

Myb_DNA-bind_7 Myb_DNA-binding

Other DBs

NCBI-GeneID:

104966612

NCBI-ProteinID:

XP_010794104

UniProt:

A0A6I9Q0N2

Position

Unknown

AA seq 2196 aa
MFRRSRFSIRPNVGATGKTASTPQESPSANQETSETPKDVGESSTASAVTDNKPPVNPSE
TPTVPGDGIDQHVEGTSSSAALQRRKRFSFKPKVAPGRPSIAARKTRTPVKAASETPISD
HYKPNTSSQTGTASAPQRLQSPRRRRPSEESKQQIIQPKPTTILSEPSVVPTTEDSTENK
SLLANTGKEFENISASQGNEASFSLPDKVPLSLPDKEAIAISEKARTLMSSKSRLSLSTP
AFSLSRLLNDPSDLQRLAKAQKLRDLLREEMHKEKVNSDYSKTKRSKKREKEFDLDPAKM
TMRDLIRYLPQSNPMTSSLEESVVENETVVPPSPGGQNVPEKVQEPEFVPKLPSQCEEEA
EAEAEAEAEAVADEEEEEEEEEEDDDAVMVPQVKVAEDGTLIIDEESLTVEVQRAKGPNP
ANERDPIFERGSTTTYSSFRKGTYCKPWSSEETDMFFLAISMVGTDFSMICQLFPLRARS
EIKNKFKKEERENSWRIDKAFRERRKLDIEYFSKLLEKILEVHKNRKKLKAMAEKKPPKE
SKKREKGRKKAGKKLSVVGGENEEEQKENPDLEKEGEKENEDLCNEAGTTAVESKKKRKI
KNTSTEEPKDKKNKTDKKSNEQDEAFIPGDKEAALPEDCQKSDMSEKTEGAKDGTIKPAK
LSRGRAPKPLLPLGRKRGKKPPPPSTTNDDASDKGEESLIDGASTEQVKKDASPSRQDQN
SKSANNGHSSEEEEATVQPPKPTRYGRVPKPTKPLNYSAKEAASETSPASPDASTASAAR
PKPKSTAKRGRSSKQQSSQESKKPKLVTLRASQSEYSDEEDEKQREEEELEEEQHVACSP
SRDSSAPVFVPAILRSPHPVISEVEETMEELDILATMPDVLGISQNALCPDDSWEWAQKE
TGTAEPCEHQLDLLVDVIDFLSIDHAEVSEDESYNEAAQTLLTIGNLAHLSQSAQNQIAI
EDQLTGTTSDSLNETREQLEEEVATKIDAVKENRATPVVSATSVNEVTETSETVTTVELQ
NIIDNNDVPILESSDQRTGSDMDPISQLTSKTDSPPTRRARLSKVKPKPNLGQASRTAQS
KSQPATSTVRAAEESPSDAPDLSQAPCPSPALDMKPSVDLASTPILTEELSGVSGAKTSQ
RRASENKDISEAQFEIRREPDRRDTRPTYGSTDEDKMSHVGTSEMSCNNPLTSDTVVAEM
QIGQGSKSNYPASCVKPLEELPAREKEESEVKSATQTRKSRFQKVNPNLTQTSRSIHSKA
QTSKDTIEKDSYSTPVTKFHEKIIAEPTFTTSTEKQIQSDVPELTDEVLMSDVKSESRCN
NPLKSNAAATDLQLGQGSIKGSVQESKDHPATCVTPVEKLPVGEKEGSEVKSTSRARKSR
FQKIKPNLNLAQTSRTVRSKGQTSKDNIEKDSDLTPTTRFHEKTIAEVEAEPTCTTSPSE
KPSHSPGPSSDCIPSLDFGITLKPTEELFTTVEKETDLEVVSGSTTTQQSASETMNLSEA
QFEPSRGQETRDTKPASESTEESASSVTPVIELPVSQKEASEVKSSCKTIRICLHQVKRR
SNLSQMSRTAQSKPQVTKDPFLPMPQAETCSSPTSRPNLPDKTTAEVEAQPSCSTIPSEQ
PSHSTASVSVQSLELDSTPKTIEQNKNVACELESSSEGSEQSVSQRRQRFPKVKPKPNLG
SSLRTTRSKLQSNDICKPAEQCHMKTSLTTEQQPSDNDDAGPGLQSECKQDMFFKATKTI
TQPTDGPTTVSDVQSSGDGSTESQIVSMQSTNTHSTPDPKESTQEPPTENDPEAPSQDAV
QQSSETNETSVKSPDEKQPEPTDSPSGKAPPTRRGRLIKPKPTLGRSRRPPQHVKNTQQA
EAADVGILSEGGDDSVCPKLVAEVVPDILKPVEGAIDQSSNTIPSPKYADTSLGSSTKVI
EQLSQHEPLVEVSGLSTGCTTQVPDSGTQDASTSSAGGTQGHPSFTIFPDMMLPQDPSDP
DEPFFILSLTEIPVSSSGEGVDSVPEPLPSLPVTDAPIEQQSVPGESLATAEEQSPPNVT
VPVPMEDSNETGVIHVKDPDDGSIEGNQVDPHERTTVHPSTVQETGQNKDETEIPPTKER
QTGTRRRETAKPQVKPKTTKRKQTSKTAAAKKAESLPIQTDTTEQLELPGPSVQPEASDD
TEPQRGRADHVEVEKETLTDVVDPEGTGSGDKNYTD

NT seq 6591 nt +upstreamnt +downstreamnt
atgttccgtcggtcaagatttagtatccggcccaatgttggtgctacaggaaaaacagca
tcaacacctcaggaatccccttcagccaatcaggagaccagtgagacccctaaggacgtt
ggtgagagctccactgcttctgctgttacagataacaagcctcctgtgaacccatcagaa
acacctacagtcccaggggatggtattgaccaacatgtggaaggtaccagctcctcagca
gccctccagagaaggaagcggttttccttcaagcctaaagtggccccaggccgcccctcc
attgctgctcggaaaacaagaacccctgtcaaggcagcctctgaaacccctatttcagac
cattacaagccaaatacgtccagccaaactgggactgcatcagcccctcagagactgcag
tccccaaggcgacggagaccttcagaagagagcaagcagcaaataattcaacccaaacca
accaccatcctttcagagccttcagttgtacctacaactgaggactctacagaaaataaa
tcgttgctggcgaacactggcaaagaatttgaaaacatttcagccagtcaaggaaatgaa
gcttctttcagtctcccggataaagtgcctctctctctaccagacaaagaagctattgca
atatcagagaaagccaggactctaatgtcatctaagagtaggctgtcactgtcaacacca
gcgttctccctgagtcgcctcctgaatgacccttcagacttacagaggcttgcaaaggcc
caaaaactcagagacctgctcagagaggagatgcacaaagaaaaggtaaactcagattat
tcaaaaaccaagagatctaagaaaagggaaaaggaatttgatttagatcctgccaaaatg
accatgagggacctcatccgttatctaccacagtctaaccccatgacatctagtttggaa
gagtccgttgtagagaatgagactgtggtcccaccttctccaggaggacaaaatgtccca
gagaaagtgcaggaacccgagttcgtcccaaaactgccaagccagtgtgaggaggaagca
gaggcagaggcagaagcagaggcagaggcagtggcggatgaggaggaggaagaggaggag
gaggaggaggatgatgatgctgtgatggttcctcaggtcaaagttgcagaggacggcaca
ctgatcattgatgaagagagcttgaccgtggaagtccagcgagccaaagggccaaatcca
gcaaatgagcgagaccccatctttgagcgtggctccactacaacttactcaagcttcagg
aaagggacctactgcaaaccctggtccagcgaagagacagacatgttctttctggcaatt
agtatggtgggaacagacttttccatgatttgccaactgtttcctctgagagcacgatca
gagataaagaacaaatttaaaaaagaagagcgagagaattcctggaggattgacaaagct
ttcagagaaaggcgcaaactggacattgagtatttttctaaactgttagaaaagatactg
gaagttcacaaaaacaggaagaaactgaaggcaatggctgagaagaaacctccaaaggag
agcaagaaaagagaaaagggccgaaagaaagctgggaagaagctgagtgttgtggggggg
gaaaatgaggaagagcagaaggaaaatcctgatttggagaaagagggagagaaggagaat
gaggacctctgtaatgaggcgggaaccactgctgttgagtctaagaaaaaacgcaaaata
aagaatacctcaactgaggaaccaaaggacaagaaaaacaaaacggataaaaagagcaat
gaacaagatgaggcctttatacctggagacaaagaggcagcacttcctgaggactgtcaa
aaatcagacatgtctgaaaagactgagggagccaaggatggcacgatcaagccagccaaa
ctttcacgaggtagagcaccaaaaccactgctgccgttgggccgaaagaggggtaaaaag
cccccacctccctccacgaccaacgatgatgcatcagataaaggagaggagagtctgatt
gatggagcatccacagagcaggtaaaaaaagatgcatcaccttcaaggcaagaccaaaat
agtaagtcagccaataatggtcattcatctgaagaggaggaagcaaccgttcaacctcca
aaacctaccaggtatggaagagtgcctaaacccaccaagcccttgaattactctgccaag
gaggctgcatctgaaaccagtcctgcctcgccagatgcgtccactgcttctgctgccagg
cctaaacccaaatccacagccaagaggggaagatcatcaaagcagcaatcatcccaagag
tccaaaaagcctaaattagtcaccctaagggcttctcagtcagaatacagtgatgaggag
gatgaaaagcagcgagaggaagaagagttggaggaggagcagcacgttgcatgcagtcca
agtagggacagctctgcccccgtatttgtgccggccattctgcgctccccacatcctgtc
atttcagaagtggaagagacaatggaggaacttgatatcttggccactatgcctgatgtg
ttgggcatctcccaaaatgcactctgccctgatgactcttgggagtgggcacaaaaagaa
acaggcacagctgaaccctgcgaacatcagctggacctgctcgttgatgttattgacttc
ctttctatagaccatgcagaagtatctgaggacgagagctacaatgaggctgctcaaacc
ctgttgacaattgggaacctggctcacctctcacagtcagcacagaatcaaatagccata
gaagatcaattaacagggacaacatcagacagtttgaatgaaaccagagaacagctagaa
gaagaggttgccacaaagattgatgcagtaaaggaaaaccgtgccactcctgttgtgtct
gcaacttctgttaatgaagtcacagaaacgtccgaaactgttaccacagtggagctacaa
aacattattgacaataatgacgtccccattcttgaatccagtgatcagaggacaggttct
gatatggatccaatctctcaattaacctcaaagacagattctccaccgaccaggagagca
cgattatccaaggtgaaaccaaaacctaacctaggccaagcttcaaggactgctcagtca
aaatcacaaccggcaacatcaacagtaagggcagctgaagaaagcccatcggatgctcct
gacctttctcaagccccttgtcctagtcctgctttggatatgaaaccgtcagtagattta
gcctctactcctattctgacagaagaactctcaggtgtatcaggtgcaaaaacatcacag
cgacgtgcgtcagaaaacaaggacatctctgaagcccagtttgaaatcagaagggaacca
gacaggagagacacaaggccaacatatgggtcaacagatgaagataagatgtctcatgtt
gggacatctgagatgagttgtaataatccactgacatctgacacagttgtcgctgaaatg
cagattggacaaggatcaaaaagcaactatcctgcttcatgtgttaaacctttagaagag
ttacctgccagagagaaagaagagagtgaagtcaaatctgcaactcaaacaaggaaaagt
cgattccagaaagtcaatcccaacctaacacagacatcaaggtccatacattctaaagct
caaacctcaaaagacaccatagagaaagactcatactcaactccagttaccaaattccat
gaaaaaataatagcagagccaactttcaccacctcaactgaaaaacaaattcaaagtgat
gttccagagttgacagatgaagttctgatgtcagatgtgaaatctgagagtagatgtaat
aatccactgaaatctaacgcagcagccacagacttgcagcttggacaagggtccatcaaa
ggctctgtccaagagagcaaagaccatcctgctacatgtgtgacacctgttgaaaagtta
cctgtcggtgagaaagaagggagtgaagtcaaatctacaagtcgggcaaggaaaagtcga
ttccagaaaatcaaacccaatctcaacctagcacagacatcaaggactgtacgttctaaa
ggccaaacttcaaaagacaacatagagaaagactcggacttgactccaactaccagattc
catgaaaaaacaatagcagaggttgaagcggagccaacttgcaccacctctccttctgaa
aaaccaagtcacagtcctggcccttcttcagattgtataccttcattggatttcgggata
actcttaaacctacagaggaactgtttacaactgtggagaaagagacagaccttgaagtt
gtatcaggctcaacaacaacacaacagagtgcctcagaaaccatgaacctctctgaggcc
cagtttgaacccagtaggggacaggaaaccagagacacaaagcctgcatctgagtcaact
gaagaatctgcttcatctgttacaccagtaatagagttacctgtcagtcagaaagaagcg
agtgaagtcaaatcttcttgtaagactattagaatatgtttacatcaagtcaaacgcaga
tccaacttatcacagatgtcgagaactgcgcagtcaaagcctcaagtcactaaagaccca
ttcctacccatgcctcaggcagagacatgctccagcccaacttcaagacctaatttacct
gacaagacaacagcagaggtagaggcacagccatcttgcagtaccatcccttctgaacaa
cctagccatagcactgcgtcagtatcagtacaatcattggaattagactccactcctaaa
accatagaacaaaacaaaaatgttgcatgtgagctagagtcaagctcagagggctctgaa
caaagtgtttcacaaagaaggcaacgctttccaaaggtcaaacccaaacccaatttggga
tcatctcttagaactacacgctcaaaactgcagtcaaatgatatctgtaaaccagcagag
cagtgtcatatgaaaacctctttaaccacagaacaacagccttctgataatgatgacgca
ggacctggtttgcaaagtgagtgcaaacaggacatgttctttaaagctacaaagacaatt
acacaaccaacggatggcccaacaacagtttccgatgtccagtcttcaggagatggttca
acagagtcccaaattgtctccatgcaatctactaatacacactccacaccagatccaaaa
gaaagcactcaggagccacctacagaaaatgaccccgaggcaccaagtcaagatgcagtt
caacaatcttctgaaaccaatgaaacaagtgtcaaaagccctgatgagaaacagccagag
ccaacagactctccctctggaaaagctcccccgactcgtagaggccgacttattaaaccc
aaacccaccctgggacgcagcaggcggcctccacaacatgtcaagaatacacaacaagca
gaagcagcagatgttggtattctctcagaaggtggggatgattcagtttgccccaaactt
gtggctgaagtcgtacctgacatcctgaaaccagtagagggcgccattgatcaaagtagt
aacacaattccctctccaaaatatgctgatacttcactgggaagctcaacaaaagtaatt
gaacaactgagtcaacatgaaccccttgtagaggtttctggattgtctactggttgcacg
acacaagtacctgactcaggtactcaggatgcatcaacatcaagtgcaggtgggacccaa
ggtcatcccagcttcacaatatttccagacatgatgttgcctcaggatccttctgatcca
gatgaaccgttcttcatcctctctctgaccgagatcccagtcagctcatctggggagggg
gtggacagtgtgcctgagcccctcccttctcttcctgtaacagatgctccaatagagcaa
cagagtgttcctggagagagtttggcaacagcagaagagcagtctccacctaatgtcact
gtgcctgtgcccatggaggacagtaatgagacaggcgtcatacatgtgaaagacccagat
gatggttcaattgaggggaatcaagtggacccacatgagagaactacagttcatccgtct
acagtgcaagagactggacagaataaagatgagactgaaattcctccgacaaaggaaaga
caaacaggcactagaagaagagaaacggccaaaccgcaggtgaagcccaaaacgacaaag
aggaaacaaaccagcaagactgccgctgctaagaaagctgagtccctccccatccaaaca
gacaccacggagcagttagagcttcctgggccttctgtgcagccagaggcttctgacgac
actgagccacagagaggaagggctgatcatgtagaagtggaaaaggagactctgacagat
gttgtggaccctgagggcaccggctcaggagacaaaaactacacggactag

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (83)   
   KEGG ORTHOLOGY (1)   
   RefGene (79)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (2)   
   Pfam (2)   
All databases (101)   

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