KEGG   Neurospora crassa: NCU06585
Entry
NCU06585          CDS       T01034                                 
Name
(RefSeq) Rad4 family protein
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
ncr  Neurospora crassa
Pathway
ncr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ncr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NCU06585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ncr03400]
    NCU06585
DNA repair and recombination proteins [BR:ncr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      NCU06585
SSDB
Motif
Pfam: Rad4 BHD_3 BHD_2 BHD_1 Transglut_core
Other DBs
NCBI-GeneID: 3878093
NCBI-ProteinID: XP_961945
UniProt: Q7S8M9
Position
IV:complement(1722162..1725912)
AA seq 1040 aa
MPPYVPRKRVRDESPPPANDLKNDAKRRKGKENLNAAKLSAPPRKPTLFDALDATASPAS
SSKTSLAALALDESSDDDSSSLSSLSDGDFEDVPVLKKQKHNVQVGEDEDEDDDEDLEFE
DVEPYQPQSTTANVPEVPAGDLELTLIRDTRISLANALGKKGPSKLERRIRVSTHCVHVQ
LLLWHNAVRNAWLCDPEVQGILLSHLPPKLWDEVDRWRRNSGLEVVVPDGGGTEASTKKK
SPAQKKTRAQVKGKAQAKGKDAAKADRSRDWGQAAKHLEKGAVDMSHGDPLFRLMKVLSA
WWKQRFRTTAPGLRKWGYMTLERLDRLTKAFNQEEHQPERFGERIASLEDFRECASECAG
SRDVGAQLFTAMLRALGLEARLVASLQPLGFGWTKVEEADPEKEEDLKPTPKKNMGATSM
AKETVTTHASGRSTRRGASRKATKIQRSNSELIAADSDDDLVISDHEPEPTPRMKNKVYD
KDLEFPHYWTEVLSPVTKKYLPVDPIVKSIIGTNRELIESLEPRGSKADKAKQVMAYVMG
YSPDGTAKDVTVRYLKRQTLPGRTKGMRIPMEKVPVYNKHGKVARYEMYDWFQTVMKGYA
RGGRSKPAMTDVDLEENATDLKPAKPEKKEVKEGQETLQYYKQSKEFVLERHLKREEALL
PNARPVKMFRNKGSSGGSSKKAATTTAATQDEPVYSRKDVVHVKSAETWHKQGRAPLPGE
QPLKRVPYRAATNNRRREIAEAERLTGQKVLQGLYSFDQTDWIIPPPIENGVIPKNEYGN
IDLFAEHMCPQGAVHVPYRGAMRVCKRLGIDYAEAVVDFEFGNRMAVPVVQGVVIAEEHH
DQVMEEVAKDEAEKKRKEDEKRRKAALGMWRKLLMGMRIVERIKQDYGHVGDEVEVFGRH
GSGGADIRELSDAEAEMGEDEETGGGGFLPEGFEVEDEERDSHLRSSFFPVVDEDDEDGE
DTLEVDHGEGEGNGDQAERKKESAVMSTKPKRKAAAAKAKASIPGSRRRTRRNVPSSEDE
DEEEDEDSELSDLEDDEEDF
NT seq 3123 nt   +upstreamnt  +downstreamnt
atgcctccatatgtaccccgcaagcgagtccgggatgaatccccgcctccagccaacgac
ctgaaaaacgatgcaaagcgaagaaaaggaaaagagaacctcaacgccgccaaattgtct
gctccacctcggaagccgactctctttgacgccctcgacgcaaccgccagtcccgcttca
tcttccaagaccagcctcgcagccttggcgctcgacgagagctccgatgacgactccagt
tctctctcatccttgtccgatggcgactttgaagacgttccggtcctcaagaaacaaaaa
cacaatgttcaagtaggcgaggacgaagacgaggatgacgacgaagatcttgaatttgaa
gacgtcgaaccctaccagccccaatcaaccacagcaaacgttcccgaagtacccgctggc
gacctcgaactgactttgatccgggacacgcgcatatccctcgccaacgcactagggaag
aaaggaccgtccaagctagagcggaggatacgcgtctcgactcattgtgtgcacgtgcag
ttgcttctctggcacaacgctgttcgtaatgcgtggctgtgcgacccagaggtgcaagga
attcttttgtcgcatctccctccgaaactttgggatgaggtggatagatggaggcggaat
agtgggttggaggtggtggtacctgatggaggtggtactgaggcttcgactaagaagaag
tcacccgcccagaagaagacgagggcgcaagtgaaaggaaaggcgcaggcgaaagggaaa
gatgctgccaaagcggacaggtcgcgcgactggggtcaagcagcgaaacatcttgaaaag
ggcgcggtagatatgagccatggcgatccactgtttcggttgatgaaagtcctcagcgcg
tggtggaagcagcggtttcggaccacggcaccggggctacggaaatgggggtacatgacg
ttggagaggttggatcgcctgacgaaagccttcaaccaggaggagcatcaaccggaacga
tttggagagcgaatcgcctctttggaagactttcgcgagtgtgcttcggaatgcgctggg
agtcgtgatgttggcgctcaactgttcacagcaatgttgagggcactggggttggaggct
aggttggtagctagtctccagcccttagggttcggctggactaaagtggaagaggcagat
ccggagaaggaagaagatctcaaaccgacccctaaaaagaacatgggagccacgagtatg
gccaaggagaccgttacaactcatgcatcagggagatctacaagacgaggcgcgagccgt
aaggcaacgaagattcaaaggtctaactcggagcttatagcagcagacagtgacgacgat
ctagtcattagtgatcacgagcccgaaccaacaccgcgaatgaagaacaaagtctacgac
aaggacctggagttcccccattactggaccgaggttctctccccagtcaccaagaagtac
ctaccagttgaccccatcgtgaaatccatcattggaacgaatagggagttgattgagtct
ctggagccacgtggtagcaaagcggacaaggccaagcaggtcatggcctacgtcatgggt
tactcgccagacggcacagcaaaggatgtcacagtgcgctacctcaagcggcaaaccttg
cctgggcgcacaaaaggcatgaggattcccatggagaaagttcccgtttacaacaagcac
ggcaaggtagcaaggtacgaaatgtacgactggttccagaccgtgatgaaaggctacgct
cgaggcggcaggagcaagcccgccatgaccgacgtcgatctagaagaaaacgcgacggac
ctgaagccagccaagcccgagaagaaggaagtcaaagagggccaagagactctacagtac
tacaagcaatccaaagagtttgtcctcgagcgacacctcaagcgcgaggaagcactcctg
cccaacgcgcgaccagtcaagatgttcaggaacaaaggcagcagcggcggcagcagcaaa
aaagcggcgaccaccacggccgccacccaagacgagcccgtctactcccgcaaggacgta
gtccacgtcaagagcgccgaaacttggcacaagcaagggcgagctccccttcccggtgag
caaccgctcaagcgcgtcccttaccgagcagcaacgaacaaccggcgacgagagattgcg
gaagccgaacggcttacaggccagaaggtgctgcagggattatacagcttcgaccaaacg
gattggatcatcccgccgcccatcgagaacggcgtcatccccaagaacgagtacggcaac
attgatttatttgctgagcacatgtgccctcagggagcggtgcacgtgccataccgcggc
gcgatgcgtgtgtgcaagcggttgggcatcgactacgcggaggcggtggtggactttgag
tttggaaacagaatggcggtgccggtggttcagggggttgttattgccgaggagcatcat
gatcaggtgatggaggaggtggccaaggatgaggcggagaagaagaggaaggaggatgag
aagcgacggaaggcggcgttgggaatgtggaggaagcttttgatggggatgcgaattgtc
gagagaatcaagcaggattatgggcatgtgggtgatgaggtggaggtctttgggaggcat
ggaagcggaggggcggatattcgggagttatccgacgccgaagcggaaatgggtgaagat
gaggaaacgggcggcggtgggtttttgcccgaaggctttgaggtggaggatgaagaaagg
gatagccatctaaggtcctctttcttcccggtggtagatgaggatgatgaggatggggag
gatacacttgaggtggatcatggcgagggagagggcaacggggaccaagcggaaaggaag
aaagagtccgcggtgatgagtacgaaacccaagcgcaaggcggctgctgccaaggcgaag
gcgagtattccaggttcgcgaaggagaacgaggcgcaatgtcccttcaagtgaggatgag
gacgaggaggaagatgaagattcggaattgtcagatttggaggatgatgaagaggatttc
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (42)   

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