KEGG   Neurospora crassa: NCU08663
Entry
NCU08663          CDS       T01034                                 
Name
(RefSeq) nonsense-mediated mRNA decay protein 3
  KO
K07562  60S ribosomal export protein NMD3
Organism
ncr  Neurospora crassa
Pathway
ncr03008  Ribosome biogenesis in eukaryotes
ncr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ncr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    NCU08663
   03008 Ribosome biogenesis in eukaryotes
    NCU08663
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ncr03009]
    NCU08663
Ribosome biogenesis [BR:ncr03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    NCU08663
SSDB
Motif
Pfam: NMD3 NMD3_OB NMD_SH3
Other DBs
NCBI-GeneID: 3878103
NCBI-ProteinID: XP_961964
UniProt: Q7S8P0
Position
IV:4181767..4183965
AA seq 519 aa
MDLDAPMAMAPLMGSARTGATILCCNCGAPIDGTSSAGALCYDCIKSTVDISQGIQREAT
LHFCKDCDRWLLPPASWVTAAPESRELLSLCLKKLRNLGKVRITDARFIWTEPHSRRVKV
QVTVQDQVADGVLMQQSFEVTYVVASQQCKDCAKSYTANVWRAAVQVRQKVTHKRTFLFL
EQLILRHQAHRDTINIKEEKDGIDFYFAQKNQAEGFISFLKSVVPVLTKESRHLISADTH
TGNKSYKYNYSVEIVPVCRDDLVALPLKLAKSIGNISPLVLCHRIGTSVNLLDPNTLQTA
EVSADIYWRAPFHPLAGTPDLVEFIVMDIESTGVRKGKWLLSEVQVARASDLGVNDNVYF
TRTHLGQHLHAGDSVLGYMLEGTNFNSDALEAIESSKAYGSMIPDVVLVKKHYPNRRRNR
KRNWKLKRMAKDEGELLPKASDQAKMDAEYEMFLRDVEEDEELRAALALYKNSLKTKREA
DAMSIADTDMMTEAEEDGPKISMDELLDDFEEMEIQDKE
NT seq 1560 nt   +upstreamnt  +downstreamnt
atggatctcgacgctcctatggccatggccccgttgatgggctctgccaggacaggtgct
accattctctgctgcaactgcggcgctcccatcgatggcacatcctccgccggcgctctt
tgctacgactgcatcaagtccaccgtcgatatctcccagggcatccagcgcgaggccacc
ctccacttctgcaaagattgcgacagatggctcctaccccccgccagctgggtcacagcc
gcccccgaatcgagagagttgttgtcgctatgcttgaagaaactgaggaatttgggcaag
gtccgcatcacagacgccaggttcatttggacagaaccccattcgcgaagagtcaaggtt
caggttacggttcaggatcaggtggcggatggtgtgttgatgcagcaaagcttcgaggtc
acttacgtcgtcgccagccagcagtgcaaggactgcgccaagtcatacacagccaacgtc
tggcgcgccgccgtacaggtccgccaaaaggtcacccacaagaggacgttccttttcctc
gaacagctcattctcaggcaccaggcccatcgcgacacaatcaacatcaaggaagagaag
gacggtatcgatttctactttgcccagaagaaccaggccgagggattcatcagcttcctg
aagtccgtcgtaccagttctcaccaaggagtcgaggcatcttatttccgcggatacacac
accggcaacaagtcgtacaagtacaactactccgtcgaaatcgtgcctgtttgcagagac
gatttggttgcccttcctctcaaactcgccaagtccattggcaacatttctccccttgtc
ctttgccacaggataggaacatctgtcaaccttctcgaccccaacaccctccagaccgcc
gaagtcagcgccgatatctactggcgtgctcccttccatccgcttgccggcactcccgat
cttgttgagtttatcgttatggacatcgagtccacaggcgtacgaaaaggaaagtggctt
ctctccgaggtccaggtcgctcgtgcctccgatctcggcgtgaacgacaacgtctacttc
actcgcacacatctcggccagcatctccacgccggtgactcggtgctgggttacatgctc
gagggtaccaacttcaactcggacgcgctcgaggcgattgagagctccaaggcgtacggt
tccatgatccctgacgttgttctcgtcaagaagcactacccgaaccgccgccgcaacaga
aagagaaactggaagctcaagcgcatggccaaggacgagggcgagctgctgcccaaggct
tcggaccaggccaagatggatgccgagtacgagatgttcttgcgcgatgtcgaggaggac
gaggagcttcgtgctgctcttgctctgtacaagaactcgctcaagaccaagagggaggcg
gatgccatgagcattgccgataccgacatgatgacggaggctgaggaggatggccccaag
atcagcatggacgagctcctcgatgactttgaggaaatggagattcaggataaggagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (28)   

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