KEGG   Naumovozyma castellii: NCAS_0C03090
Entry
NCAS_0C03090      CDS       T02233                                 
Symbol
NCAS0C03090
Name
(RefSeq) hypothetical protein
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
ncs  Naumovozyma castellii
Pathway
ncs03040  Spliceosome
ncs04139  Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:ncs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NCAS_0C03090 (NCAS0C03090)
 09140 Cellular Processes
  09141 Transport and catabolism
   04139 Mitophagy - yeast
    NCAS_0C03090 (NCAS0C03090)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncs03019]
    NCAS_0C03090 (NCAS0C03090)
   03041 Spliceosome [BR:ncs03041]
    NCAS_0C03090 (NCAS0C03090)
   03032 DNA replication proteins [BR:ncs03032]
    NCAS_0C03090 (NCAS0C03090)
Messenger RNA biogenesis [BR:ncs03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     NCAS_0C03090 (NCAS0C03090)
Spliceosome [BR:ncs03041]
 Complex A
  U1 snRNP components
   Sm proteins
    NCAS_0C03090 (NCAS0C03090)
  U2 snRNP components
    NCAS_0C03090 (NCAS0C03090)
 Complex B
  U1 snRNP components
    NCAS_0C03090 (NCAS0C03090)
  U4/U6.U5 tri-snRNP components
    NCAS_0C03090 (NCAS0C03090)
 Complex C
  U2 snRNP components
    NCAS_0C03090 (NCAS0C03090)
DNA replication proteins [BR:ncs03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     NCAS_0C03090 (NCAS0C03090)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 11528110
NCBI-ProteinID: XP_003675665
UniProt: G0VCT9
Position
3:608811..609119
AA seq 102 aa
MSSNSIPVKLLNEAQGHIVSIELTTGETYRGKLIESEDNMNVQLRDVVVTQTDSKITRMD
HVFVRGSHIKFFVVPDMLKNAPLFKTGPQSRPTPPIRGPKRR
NT seq 309 nt   +upstreamnt  +downstreamnt
atgagtagtaacagtataccggtgaagctactaaatgaggcacagggccatatagtttcg
atagagttaacgacgggggagacgtatcgtggcaagttgatagagagcgaagataatatg
aatgtacaattacgagacgtggttgtgacgcagacggatagtaagattacacgtatggac
catgtatttgtcagggggtcacacatcaagttctttgttgttccagatatgttaaagaat
gcaccattgttcaaaactgggcctcaatcgagacctacaccacctatccgtggacctaag
aggagatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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