KEGG   Candidatus Nitrosomarinus catalina: NMSP_1275
Entry
NMSP_1275         CDS       T04846                                 
Symbol
endA_2
Name
(GenBank) tRNA-splicing endonuclease
  KO
K01170  tRNA-intron endonuclease, archaea type [EC:4.6.1.16]
Organism
nct  Candidatus Nitrosomarinus catalina
Brite
KEGG Orthology (KO) [BR:nct00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:nct03016]
    NMSP_1275 (endA_2)
Enzymes [BR:nct01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     NMSP_1275 (endA_2)
Transfer RNA biogenesis [BR:nct03016]
 Prokaryotic type
  tRNA spricing factors
   tRNA splicing endonucleases
    NMSP_1275 (endA_2)
SSDB
Motif
Pfam: tRNA_int_endo tRNA_int_endo_N CpsB_CapC
Other DBs
NCBI-ProteinID: ARS64890
UniProt: A0A2Z2HVV7
Position
complement(1006005..1006568)
AA seq 187 aa
MDETIEVRGDLILDQACISEHKMIHDLEQKGFGEITKGKLFLKSFETLYLLYTRKLFLKK
NKKQIDFDTFMNICQKTNPEILTKFLIFRDLKTRGYVVKDGFGFGSDFRVYERGHFGEKG
AKFLIFGLNEGQQEKMGALQKKIDEITQMGKEPIIAVIERRGEVIYYKINKMNFLENKSR
LEGNFEF
NT seq 564 nt   +upstreamnt  +downstreamnt
atggatgagactattgaagttagaggagacttgattttagatcaagcctgtatttccgaa
cataagatgatccatgatcttgagcaaaagggatttggtgaaatcactaaagggaaatta
tttctaaagtcttttgaaacattgtatttgctatatactcgtaaattatttctaaagaaa
aataaaaaacaaattgattttgatacttttatgaatatttgtcaaaaaacaaatcctgag
attctaacaaaatttttgatatttagagatctaaagaccagaggatatgttgttaaagac
ggatttggatttggttctgattttcgagtttatgaaaggggccattttggtgagaagggt
gccaaattcttgatttttggtcttaacgaagggcaacaagagaagatgggcgcattacaa
aaaaagattgatgagattactcaaatgggaaaagagcctattattgcagtaattgaaaga
cgtggtgaagtaatttattacaaaatcaataaaatgaatttcctagaaaataaaagccgt
ttagaaggaaattttgaattttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (34)   

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