KEGG   Candidatus Nitrosomarinus catalina: NMSP_1549
Entry
NMSP_1549         CDS       T04846                                 
Symbol
tfe
Name
(GenBank) Transcription factor E
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
nct  Candidatus Nitrosomarinus catalina
Pathway
nct03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:nct00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    NMSP_1549 (tfe)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nct03021]
    NMSP_1549 (tfe)
Transcription machinery [BR:nct03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     NMSP_1549 (tfe)
 Prokaryotic type
  Archaeal type
    TFE
     NMSP_1549 (tfe)
SSDB
Motif
Pfam: TFIIE_alpha TrmB Sigma70_r3
Other DBs
NCBI-ProteinID: ARS65149
UniProt: A0A2Z2HRJ6
Position
1223616..1224131
AA seq 171 aa
MVDKYEDPFVRIASMIGGDEYLKVARSLLKAEDATDEEIASSTGLRINMVRKVLYDLFGK
SLITGIRVKDERKGWFVYRWRTRREEVEHFIENQKKKIEERLQQRFDYENASDFYHCGNE
DCPRVTFEDALEGMFKCPSCQNVLNIKKNEKSRKAYSKKIDEIKKDMQQTF
NT seq 516 nt   +upstreamnt  +downstreamnt
ttggtagacaaatacgaagatccttttgttagaattgcatcaatgattggaggagatgaa
tatctcaaagtagcaagatctctgttaaaggccgaagatgcaactgatgaagaaatagcc
agttcaacaggtcttagaattaacatggtaagaaaagtgctatacgatctttttggaaaa
tctttgattacaggtattagagtaaaggatgaaagaaaaggatggtttgtttacagatgg
agaacaagacgagaagaagtagaacattttattgaaaatcaaaaaaagaaaattgaagag
agattacaacaaagatttgattatgaaaatgcatcagacttttatcattgtggaaatgag
gattgtccaagagttacatttgaagatgcattggagggcatgttcaaatgtccatcatgt
caaaatgtattaaatataaaaaagaatgaaaaatctcgaaaagcatattcaaaaaagata
gatgaaatcaaaaaagatatgcaacaaacattttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (31)   

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