KEGG   Candidatus Nitrosocaldus cavascurensis: NCAV_1687
Entry
NCAV_1687         CDS       T05329                                 
Symbol
pcn
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
ncv  Candidatus Nitrosocaldus cavascurensis
Pathway
ncv03030  DNA replication
ncv03410  Base excision repair
ncv03420  Nucleotide excision repair
ncv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ncv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NCAV_1687 (pcn)
   03410 Base excision repair
    NCAV_1687 (pcn)
   03420 Nucleotide excision repair
    NCAV_1687 (pcn)
   03430 Mismatch repair
    NCAV_1687 (pcn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ncv03032]
    NCAV_1687 (pcn)
   03400 DNA repair and recombination proteins [BR:ncv03400]
    NCAV_1687 (pcn)
DNA replication proteins [BR:ncv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    NCAV_1687 (pcn)
DNA repair and recombination proteins [BR:ncv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     NCAV_1687 (pcn)
   MMR (mismatch excision repair)
    Other MMR factors
     NCAV_1687 (pcn)
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    NCAV_1687 (pcn)
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad1 Rad9 DUF5748
Other DBs
NCBI-ProteinID: SPC34850
UniProt: A0A2K5AT80
Position
NCAV:1482929..1483798
AA seq 289 aa
MLIARSKSAEEWKTIVSAISTIVEEATFEATSEGISFRGMDPSHVALIDVQLLNSAFEYY
KCDGSIRFAVRVDEFLKLLKRAGKEDSIEVSIGGAGAVGESRRERGEEEVEEEEEREVTA
LEESKEKEMVALASDENMLSIKMVSKYTRQYKMRLIESTSSSTPLPKITFNTKVVMKMAQ
FIEALKDVEIVSDYITIRCDGNMLQLIGKGDSGDAVITFNKGDEGVEEMSSNGESNATYS
LEYLGSIVKAVDNADSIVIEYSTRMPLRLEFKMPYMCRIYFYLAPRVEA
NT seq 870 nt   +upstreamnt  +downstreamnt
atgctaatagcaaggagcaagagtgcagaggaatggaagaccatagtatctgcaataagc
accatagttgaggaggctacattcgaggctaccagcgagggcatatcgttcagaggtatg
gaccctagccatgttgcgctcatagatgtgcagttgctcaactctgcatttgagtactac
aagtgtgatggtagcataaggttcgctgttagggtagatgagttcctaaagttactgaag
agggcaggtaaggaggatagcatagaggttagcatagggggtgcaggtgctgttggggag
agcaggagggagagaggagaggaggaggttgaagaggaagaggaaagggaggttacagca
ttagaagagagtaaagagaaggagatggttgctcttgcttctgatgagaacatgctctct
ataaagatggtgagcaagtacacaaggcagtacaagatgaggttgatagagagtacttct
agttcaacaccattaccaaagataaccttcaacacgaaggttgttatgaagatggctcaa
ttcattgaggcattgaaggatgtagagatagtctcagattacataacgattaggtgtgat
ggtaacatgctacagttgataggcaagggagatagtggggatgctgtaatcacattcaac
aagggggatgagggggttgaggagatgagtagcaatggggagagtaatgctacgtacagc
ctagagtaccttgggagcatagttaaggcagtagataatgcagatagcatcgttatagag
tactctacaaggatgcctttgaggcttgagtttaagatgccctacatgtgcaggatatac
ttctaccttgcaccaagggttgaggcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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