KEGG   Nocardia cyriacigeorgica: NOCYR_0002
Entry
NOCYR_0002        CDS       T01756                                 
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
ncy  Nocardia cyriacigeorgica
Pathway
ncy03030  DNA replication
ncy03430  Mismatch repair
ncy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ncy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NOCYR_0002 (dnaN)
   03430 Mismatch repair
    NOCYR_0002 (dnaN)
   03440 Homologous recombination
    NOCYR_0002 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ncy03032]
    NOCYR_0002 (dnaN)
   03400 DNA repair and recombination proteins [BR:ncy03400]
    NOCYR_0002 (dnaN)
Enzymes [BR:ncy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NOCYR_0002 (dnaN)
DNA replication proteins [BR:ncy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NOCYR_0002 (dnaN)
DNA repair and recombination proteins [BR:ncy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NOCYR_0002 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_2 DNA_pol3_beta_3 SEF14_adhesin
Other DBs
NCBI-ProteinID: CCF60827
UniProt: H6R589
Position
3521..4684
AA seq 387 aa
MKFRVAREDFAESVAWVARSLPSRPPVPVLGGVLLVADEDGLTVSGFDYEVSAQMRVAAE
VAGPGQVLVSGRLLADITKALSNKPVDVSVDGTRVLISCGSAKFSLPTMPVEDYPQLPEV
PQQSGELNAEVFAEAVAQVAVAAGRDDTLPMLTGIRVEIEGPQVVLAATDRFRLAVRHIE
WQPARPDIETAVLIPARTLSESAKTLGATDAPVQLSLGTGAGADGLLGIVNAGRRTTTRL
LDAEFPKFRQLLPKEHTSIATLQVATLTDAIKRVALVAERGAQVRLEFSGEGLLLSAGGD
DAGRAEEWLEADFRGEPLTIAFNPGYLIDGLSALHSDRVTFGFTTPSRPAVLLPASEDEE
PQPLESGSFPALDSAYIYLLMPVRLPG
NT seq 1164 nt   +upstreamnt  +downstreamnt
atgaagtttcgggtcgctcgtgaggatttcgcggaatcggtcgcctgggtggcgcgcagc
ctgccgtcccggcctccggtgcccgtcctcggcggtgtgctgctggtagccgacgaagac
ggcctcacggtctccggtttcgactacgaggtctccgcgcagatgcgggtcgcggccgag
gtcgccggcccgggccaggtgctggtctccggtcgcctgctcgccgatatcaccaaggcg
ctgtccaacaagccggtcgacgtctccgtcgacggcacccgcgtgctgatcagctgtggc
agcgccaagttctccctgcccaccatgccggtcgaggactatcctcagcttcccgaggtg
ccgcagcagagcggtgaactcaacgccgaggtgttcgccgaggcggtcgctcaggtggcc
gtggccgcgggccgcgacgacaccctgccgatgctcaccggtatccgggtcgagatcgag
ggcccacaggtggtcctggcggccaccgaccgtttccggctcgcggtgcgccacatcgaa
tggcagccagcgcgccccgatatcgagaccgcggtgctcattccggcccgcacgctgtcg
gagtcggccaagaccctcggcgccaccgatgcgccggtgcaactgtcgctgggtacggga
gccggcgccgatgggctgctcggcatcgtcaacgcgggccggcgcaccaccacccgcctg
ctggacgcggaattccccaagttccgtcagctgctccccaaggagcacacctcgatcgcg
acgctgcaggtcgccaccctcaccgatgccatcaagcgtgtggccctggtggccgagcgc
ggggcccaggtgcggctggagttctccggcgagggcctgctgctgtcggccggcggtgac
gacgcaggccgcgccgaggaatggctggaggccgatttccgtggcgagccgctgaccatc
gccttcaaccccggctacctcatcgacggcttgtccgcgttgcattcggatcgcgtcacc
ttcgggttcaccaccccgagccgtcccgcggtgctgctgccggcgtccgaggacgaggag
ccgcagccgctggagtccggctccttccccgccctggacagcgcctacatctacctgttg
atgccggtccggctcccgggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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