KEGG   Nocardia cyriacigeorgica: NOCYR_4000
Entry
NOCYR_4000        CDS       T01756                                 
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
  KO
K00566  tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
Organism
ncy  Nocardia cyriacigeorgica
Pathway
ncy04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:ncy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    NOCYR_4000 (trmU)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ncy03016]
    NOCYR_4000 (trmU)
Enzymes [BR:ncy01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.13  tRNA-uridine 2-sulfurtransferase
     NOCYR_4000 (trmU)
Transfer RNA biogenesis [BR:ncy03016]
 Prokaryotic type
  tRNA modification factors
   Thiolation factors
    NOCYR_4000 (trmU)
SSDB
Motif
Pfam: tRNA_Me_trans tRNA_Me_trans_M tRNA_Me_trans_C ThiI
Other DBs
NCBI-ProteinID: CCF64761
UniProt: H6R742
Position
complement(4407243..4408325)
AA seq 360 aa
MSGGVDSAVAAARAVDAGHDVVGVHLALSATPGTLRTGSRGCCSKEDAGDARRAADVLGI
PFYVWDFADRFKEDVIDDFVAAYAAGETPNPCLRCNEKIKFSALADRAVALGFDAVVTGH
YARLSDGVLRRAVDADKDQSYVLAVLTAEQLSRAMFPVGDTPKPRIREEAAERGLAVANK
PDSHDICFIPSGDTRAFLGAKIGIRPGAVVDADGTELATHDGVHGFTIGQRKGLGLPGPA
ADGKPRYVTDIDPDSGTVRVGSAEDLQVWTIEADRAIWTSGSAPEGPVECVVQVRAHGGT
APAVAEATGPGLTVRLREPLTGVARGQAVVLYLPDADGDQVIGSGTIAATARTAPSGAPR
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgagcggtggtgtggattcggcggtggccgccgcgcgcgccgtcgacgccggtcatgac
gtggtcggcgtccatctggcgctgtcggccacaccgggcacgttgcgcaccggttccagg
ggctgctgctcgaaggaagacgccggtgatgcccgccgggccgccgacgtgctcggcatc
ccgttctacgtctgggatttcgccgaccgcttcaaggaagatgtcatcgacgatttcgtg
gcggcctacgcggcgggtgagacacccaacccgtgcctgcgctgcaacgagaagatcaag
ttctccgccttggccgatcgcgcggtcgcgctcggtttcgacgccgtcgtcaccggccat
tacgcgcggctgtccgatggcgtgctgcgccgcgcggtcgacgccgacaaggatcagtcc
tacgtgctggccgtgctgaccgccgagcagctctcgcgcgccatgttcccggtgggtgac
acccccaagccgcggatccgcgaggaggccgccgagcgcggtctggccgtggcgaacaag
cccgacagccacgacatctgcttcatcccctccggcgatacccgcgcgttcctcggtgcc
aagatcggcatccggcccggcgccgtggtcgatgccgacggcaccgaactggccacccac
gacggtgtgcacgggttcaccatcggccagcgcaaggggctcgggctgcccggccccgcc
gccgacggcaagccgcgctacgtcaccgacatcgatcccgactccggcacggtgcgggtc
ggctcggccgaggacctgcaggtgtggacgatcgaggccgaccgtgcgatctggacctcg
ggctcggccccggagggtccggtcgagtgtgtggtgcaggtgcgcgcgcacggcgggacc
gccccggccgtcgccgaggccaccggtcccgggctgacggtgcggctgcgtgagccgctg
accggcgtcgctcgcggtcaggccgtcgtgctgtatctgcccgacgccgatggcgatcag
gtgatcggcagcggcacgatcgccgcgaccgcgcgcacggccccctccggcgccccccgg
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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