KEGG   Neisseria cinerea: NCTC10294_00127
Entry
NCTC10294_00127   CDS       T06828                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
ncz  Neisseria cinerea
Pathway
ncz03030  DNA replication
ncz03430  Mismatch repair
ncz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ncz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NCTC10294_00127 (dnaE)
   03430 Mismatch repair
    NCTC10294_00127 (dnaE)
   03440 Homologous recombination
    NCTC10294_00127 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ncz03032]
    NCTC10294_00127 (dnaE)
   03400 DNA repair and recombination proteins [BR:ncz03400]
    NCTC10294_00127 (dnaE)
Enzymes [BR:ncz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NCTC10294_00127 (dnaE)
DNA replication proteins [BR:ncz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NCTC10294_00127 (dnaE)
DNA repair and recombination proteins [BR:ncz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NCTC10294_00127 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DNA_pol_IIIA_C HROB
Other DBs
NCBI-ProteinID: SQF82705
Position
1:complement(111506..115009)
AA seq 1167 aa
MTYTAIQRQPCYNTPFIVHADFAMTEPTYIPLRLHTEFSITDGMVRIKKLIAKAQEYGLP
ALGISDLMNEFGLVKFYKACRSAGIKPIGAADVWIGNPNAPDKPFRAMLIIRNDAGYLRL
SELLTEAYVGKDRNIHHTELNPEWLENGDNSGLICLSGAHYGEVGVNLLNGNEDAARAAA
LKYAAWFPDAFYLELQRLPERPEWEACVSGSVKLAEELGLPVVATHPTQFMSRDDFNAHE
ARVCIAGGWVLTDKKRPRDFTPSQFFIPPETMAERFADLPEALENTVEIAKRCNLHITLG
KNFLPLFPTPDGLSLDDYLVKLSNEGLQERMVQLYPDEAERAAKMPEYQERLDFELNIII
QMKFPGYFLIVQDFINWAKTHGCPVGPGRGSGAGSLVAYSLKITDLDPLKYALLFERFLN
PERVSMPDFDVDFCQANRGRVIEYVREKYGAEAVSQIVTFGTMSSKAVIRDVGRVLELPF
MLCDKLSKLIPLEANKPLSLEKAMEAEPQIQELIEAEEADELITLAKKLEDLTRGLGMHA
GGVLIAPGKISDYSPVYQADESASPVSMYDKGDVEDVGLVKFDFLGLRNLTIIEMAQNNI
KNTTGDIVDVGKIPLDDQAAYQIFRDANTTAVFQFESTGMKKMLKTAHTTKFEELIAFVS
LYRPGPMDNIPDFVARMKGQEFQYIHPLLEGILAPTYGIMVYQEQVMQAAQIIGGYSLGG
ADLLRRAMGKKKPEEMVKHREIFAEGAAKQGISREKSDEIFNYMEKFAGYGFNKSHAAAY
ALISYQTAWLKAHYPAEFMAATMSSELDNTDQLKHFYDDCRANGIEFLPPDINESDYRFT
PYPNMKIRYALGAIKGTGEAAVESIIAARQSGGKFTGLLDFCERVGKEHMNRRTLEALIR
GGAFDSIEPNRAMLLANIDLAMNNADQKAANANQGGLFDMMEDAIEPVRLVNAPMWSESE
KLTEEKTVIGFYLSGHPFSPYAQEVRQIAPTKLGRLKPQDSVRLAGFVTAVRTMMGKRGK
IAFVSLEDLSGQIEIMVSGQTLENCADYLKSDQVLIIESKVSRDDYGGGDGLRIMANQVM
TLQMARERYARSLSLALAPGHDIARLAAILTAHRLPDTSHIPLQLSYSNGKASGKLKIAP
KWMVTPSTGLFDELETLLGSRSVRVNW
NT seq 3504 nt   +upstreamnt  +downstreamnt
atgacctacaccgccatccaaagacaaccctgctacaatacgccttttattgttcacgcc
gattttgccatgaccgagccgacctacatcccgctgcgcctgcataccgaattctcgatt
accgacggtatggtgcggattaaaaaactgattgccaaagcgcaggaatacggtttgcct
gctttgggcatcagcgatttgatgaacgaattcggcttagtgaaattctataaagcctgc
cgcagcgcggggattaaacccatcggggcggcggatgtgtggataggtaatccgaatgcg
cccgacaagccgtttcgcgccatgctgattatccgcaacgatgcgggctatctacgcttg
agcgagcttttgacggaggcctatgtcggcaaagaccgcaatatccatcatacggaactc
aaccccgaatggctggaaaacggcgacaacagcggcttgatttgtttgagcggcgcgcat
tacggcgaagtgggcgtgaatctgttgaacggcaatgaagacgcggcgcgtgcggcggcg
ttgaaatatgcggcatggtttcccgatgcgttttatttagaactgcaacgcctgcccgaa
cgccccgaatgggaggcttgcgtttccggcagcgtgaagctggcggaggaattgggtttg
ccggtggtggcgacgcatccgacgcagtttatgagccgcgacgacttcaacgcacacgag
gcgcgagtgtgtatcgcgggcggctgggtactgacggacaaaaaacgtccgcgcgatttt
acgccgagccagtttttcattccaccggaaaccatggccgaacgtttcgccgatttgcct
gaggccttggaaaacacggtagaaattgccaaacgctgcaacctgcacatcacattgggc
aaaaacttcctgccgctcttccctactccggacggcctgtcgctggatgattatttggta
aaactgtccaacgagggtttgcaggaacgcatggttcagctttatcccgacgaggcggag
cgtgcggcaaaaatgccggaatatcaggaacgtttggattttgagctgaacatcattatc
cagatgaaattccccggttatttccttatcgtacaagactttatcaactgggcgaaaaca
catggctgtccggtcggaccgggccgtggttcgggtgcaggctcgctggtggcgtattca
ttgaagattaccgaccttgatccgctcaaatacgcgctactgttcgaacgtttcttaaac
cctgaacgcgtttccatgcccgactttgacgtggacttctgtcaggcaaaccgcggccgc
gtgattgaatatgtgcgcgagaaatacggcgcggaagcggtcagtcagattgtgaccttc
ggcacaatgtcgtccaaagcggtcatccgcgacgtcggacgcgtactagaactgccgttt
atgctgtgcgacaaactgtccaagctgattccgttggaagccaacaaacctctgagtttg
gaaaaagccatggaggccgagccgcagattcaggaattgattgaggcagaagaagcggac
gaactgattacgctggcgaaaaagctggaagacctgacgcgcggtctgggtatgcacgca
ggcggcgtgttgattgcgccgggcaagatttccgattacagccccgtgtatcaggcggac
gaatccgcctcgcccgtatccatgtacgacaagggcgacgtggaagacgtgggcttggtg
aaattcgactttttgggtctgcgcaacttgaccattatcgaaatggcgcagaacaacatc
aaaaacaccaccggcgatattgtcgatgtcggcaagattccgctcgacgaccaggctgcc
taccaaatcttccgcgatgcaaacaccaccgccgtattccagttcgagtcgaccggcatg
aaaaaaatgctgaaaacggcgcatactaccaagtttgaagaacttatcgccttcgtatcg
ctctaccgccccggcccgatggacaacatccccgacttcgtcgcgcgcatgaagggtcag
gaattccaatacatccacccactgctcgaaggcatcctcgcgccgacctacgggattatg
gtgtatcaggaacaagtgatgcaggcggcgcagattatcggcggctactcgctcggcggt
gcggacttgctgcgtcgcgccatgggtaagaaaaagcccgaagaaatggtgaaacaccgc
gaaatcttcgccgaaggcgcggcaaaacaaggcatttcgcgcgaaaaatccgacgaaatc
ttcaactatatggaaaaattcgccggctacggtttcaacaaatctcacgccgccgcctac
gccctgatttcctaccagaccgcatggctcaaagcccactatcccgccgaatttatggcg
gcgacgatgtcgtccgaattggacaacaccgaccagctcaagcatttctacgacgactgc
cgcgccaacggcatcgagttcctgccgcccgacatcaacgaatccgactaccgtttcacg
ccgtatccgaacatgaagatccgctacgcactcggcgcgattaaaggcacgggcgaagca
gccgtcgaatccatcatcgccgcgcggcaaagcggcggcaagtttacgggcctcttggac
ttctgcgagcgcgtcggcaaagaacacatgaatcgccgcaccctcgaagccctgatacgc
ggcggcgcgttcgacagcatcgaacccaaccgcgccatgctcttggcgaacatcgacctc
gccatgaacaacgccgatcaaaaagccgccaacgccaatcagggcggacttttcgacatg
atggaagacgccatcgaaccggtgcggctcgttaacgcgcccatgtggagcgaatcagaa
aaactcaccgaagaaaaaactgtcatcggcttctacctctctggccacccgttcagccca
tatgcccaagaagtccgccaaatcgccccgaccaaattaggtcgtctgaaaccgcaagac
agcgtgcgcctcgccggattcgtgaccgccgtgcgcaccatgatgggcaaacgcggcaaa
atcgccttcgtcagcctcgaagatttgagcggacagattgaaatcatggtcagcggccag
acgctggaaaactgcgccgactacctcaaatccgaccaagtgctgattatcgaatccaaa
gtcagccgcgacgattacggcggcggagacgggctgcgcatcatggcaaaccaagttatg
accctgcaaatggcgcgcgaacgctacgcccgcagcctcagcctagccctcgcccccggc
catgacatcgcacgcctcgccgccatcctcaccgcccaccgtctgcccgacacgtcgcac
atcccgctgcaactgtcgtacagcaacggcaaagcatcaggcaaattgaaaattgcgcca
aaatggatggtaacgccaagcaccggcttgtttgacgaactggaaacattgcttggcagc
cggtcggtgcgcgtcaactggtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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